RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 FdpsQ920E5 353 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 PpidQ9CR16 370 aaKnown RBP17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm11549A0A286YD83 63 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 FsbpQ8BKE5 299 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Xpo5Q924C1 1204 aaKnown RBP17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ola1Q9CZ30 396 aaKnown RBP17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Abcg8Q9DBM0 673 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 HnrnpdQ60668 355 aaKnown RBP17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ankrd13dQ6PD24 605 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Sfrp1Q8C4U3 314 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cog3Q8CI04 820 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Plac9Q8K262 108 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Sike1Q9CPR7 207 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Trpc4Q9QUQ5 974 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ace3D0G895 737 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ifit3Q64345 403 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cox10Q8CFY5 443 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Vps11Q91W86 941 aaKnown RBP17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pcdha10Q91Y20 946 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Serpinb1aQ9D154 379 aa17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Chordc1Q9D1P4 331 aaKnown RBP17.07■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Asxl2Q8BZ32 1370 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm4952Q5FW57 296 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gdpd5Q640M6 607 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Prl7b1Q8CGZ9 251 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Znf467Q8JZL0 594 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Plekha4Q8VC98 588 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Olfr805Q8VFI4 319 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Lpgat1Q91YX5 370 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cnga3Q9JJZ8 631 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cdc42ep4Q9JM96 349 aaKnown RBP17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Zcchc7B1AX39 541 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 ApoeP08226 311 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Psma2P49722 234 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Rgs16P97428 201 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Grin2cQ01098 1239 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Trim63Q38HM4 350 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Scube1Q6NZL8 1018 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Med15Q924H2 789 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Polr3eQ9CZT4 710 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Tmem53Q9D0Z3 276 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gtf2h1Q9DBA9 547 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Plxnc1Q9QZC2 1574 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Kpna7C0LLJ0 499 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 SelenovD3YXG1 328 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Hspa2P17156 633 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cma1P21844 247 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Krt6aP50446 553 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Moxd2Q7TT41 619 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Sh3tc1G3X9F6 1346 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Clca3bE9PUL3 1044 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm4841E9QAA8 417 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pik3r2O08908 722 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Il12bP43432 335 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 UcmaQ14BU0 138 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ddb1Q3U1J4 1140 aaKnown RBP17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Kctd19Q562E2 927 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Rbbp7Q60973 425 aaKnown RBP17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Noc4lQ8BHY2 516 aa17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Tbrg4Q91YM4 630 aaKnown RBP17.06■□□□□ 0.32
Col17a1-202ENSMUST00000086923 GuloP58710 440 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gsdmc2Q2KHK6 480 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 9130409I23RikQ3TS87 320 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cdc14aQ6GQT0 603 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Camta2Q80Y50 1208 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Snx16Q8C080 344 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pacs1Q8K212 961 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Glra3Q91XP5 464 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Sec16bQ91XT4 1051 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Q9D2Q3 444 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gucy2dA0A0U1RPR8 1117 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Tex28B1AYN9 409 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm6685D3YYP3 228 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Rgsl1H3BL40 1073 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Galnt3P70419 633 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Trmt10cQ3UFY8 414 aaKnown RBP17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Nr1h4Q60641 488 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Tmc4Q7TQ65 694 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Q80Y73 168 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Q8BWQ6 963 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Aim2Q91VJ1 354 aaKnown RBP17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Olfm1O88998 485 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Atxn10P28658 475 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm156Q58A37 223 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Dlg4Q62108 724 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 RnpepQ8VCT3 650 aaKnown RBP17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Khdrbs3Q9R226 346 aaKnown RBP17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm8011K7N6Y5 207 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 SucoQ8C341 1250 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Snap47Q8R570 413 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Sh3bp5lQ99LH9 392 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pou5f2Q9DAC9 329 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 CtsrQ9JIA9 334 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cyp2ab1S4R196 498 aa17.05■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm13941A2AJ38 245 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm21897J3KMP5 500 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm21750L7N228 499 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Scn1bP97952 218 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 HexdcQ3U4H6 486 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 IcmtQ9EQK7 283 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms