RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Gm7535F7CXE4 302 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Dnajb6O54946 365 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Psmc3O88685 442 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 GalcP54818 684 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tbx3P70324 741 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rasip1Q3U0S6 961 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ankrd27Q3UMR0 1048 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ddx17Q501J6 650 aaKnown RBP10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tmem145Q8C4U2 746 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 H2afy2Q8CCK0 372 aaKnown RBP10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Sept8Q8CHH9 429 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Lrrc14Q8VC16 493 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tp53P02340 387 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rcn1Q05186 325 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 3830417A13RikQ8BQJ2 303 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rbp3P49194 1234 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ctdnep1Q3TP92 244 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Mapre2Q8R001 326 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ndufb9Q9CQJ8 179 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Scgb2b20Q9JI02 112 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Krt6bQ9Z331 562 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Kat6bQ8BRB7 1872 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Nmt2O70311 529 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Fam167bP17257 162 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 HpcaP84075 193 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Klra9Q2TJJ8 266 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Cul4aQ3TCH7 759 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Atp13a5Q3TYU2 1216 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tbc1d12Q6A039 696 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 SvoplQ6PDF3 494 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ano5Q75UR0 904 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tdrd7Q8K1H1 1086 aaKnown RBP10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tmco1Q921L3 188 aaKnown RBP10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Scrn1Q9CZC8 414 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 PygmQ9WUB3 842 aaKnown RBP10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Arih1Q9Z1K5 555 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rasgrp1Q9Z1S3 795 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ces1bD3Z5G7 567 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Zfp780bE9Q2S6 806 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Kpna6O35345 536 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Zfp607aQ3TQG9 686 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Sun2Q8BJS4 731 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ythdf3Q8BYK6 585 aaKnown RBP10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Nmrk1Q91W63 195 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Atp5oQ9DB20 213 aaKnown RBP10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Sh2d3cQ9QZS8 854 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Dhx35A2ACQ1 703 aaKnown RBP10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rfpl4bJ3QPR6 266 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ddit3P35639 168 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Sipa1P46062 1037 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Fam183bQ5NC57 135 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rnf139Q7TMV1 668 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tmc4Q7TQ65 694 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pdzph1Q8BGR1 1238 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 E2f7Q6S7F2 904 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Kat2bQ9JHD1 813 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ppp2r3cQ9JK24 453 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Trp53inp1Q9QXE4 239 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Trip4Q9QXN3 581 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pkp3Q9QY23 797 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Cdk7Q03147 346 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Oas1cQ924S2 362 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gmeb1Q9JL60 562 aa10.86□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Frmd7A2AD83 703 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Vmn1r213Q8R278 384 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 MpndQ3TV65 487 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Chi3l1Q61362 389 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tmem270Q6UJB9 264 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Slx1bQ8BX32 270 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ttc16Q8C1F5 767 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ddx47Q9CWX9 455 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gm5483B2RV77 97 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ppp4cP97470 307 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tnfaip2Q61333 691 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Dync1li2Q6PDL0 492 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Mapre3Q6PER3 281 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 DaglbQ91WC9 669 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pcdhb1Q91Y08 818 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tmed10Q9D1D4 219 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Large1Q9Z1M7 756 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Olfm1O88998 485 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 ZufspQ3T9Z9 577 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Rab14Q91V41 215 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ubxn2aQ99KJ0 258 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Ndufaf1Q9CWX2 328 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Cfap44E9Q5M6 1843 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tmem131lQ3U3D7 1597 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Armcx5Q3UZB0 606 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Mxd4Q60948 209 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Gm2163Q6PCY5 473 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Smarca1Q6PGB8 1046 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Vps50Q8CI71 964 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Pphln1Q8K2H1 381 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Mrpl57Q9CQF8 102 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tcp10bE9PYJ0 438 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Tcp10cE9Q046 482 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Myl4P09541 193 aaKnown RBP10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Man1a2P39098 641 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 Klhl31Q8BWA5 634 aa10.85□□□□□ -0.67
Scn8a-201ENSMUST00000082209 DnerQ8JZM4 737 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms