RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Heatr3Q8BQM4 679 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Trmt13Q8BYH3 481 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Map1sQ8C052 973 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 NcaldQ91X97 193 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Q99KU6 348 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Q9DA42 136 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Slc5a4aQ9ET37 656 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Tspoap1Q7TNF8 1846 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Polr2aP08775 1970 aaKnown RBP16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Tubb1A2AQ07 451 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Ass1P16460 412 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Rab21P35282 222 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Smad1P70340 465 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Sh3bp2Q06649 559 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Znf746Q3U133 652 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Grid1Q61627 1009 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Ddhd1Q80YA3 547 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Kirrel3Q8BR86 778 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Kat14Q8CID0 779 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Tspan8Q8R3G9 235 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Olfr385Q8VGT1 312 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 IrgqQ8VIM9 583 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 St13Q99L47 371 aaKnown RBP16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Cyp39a1Q9JKJ9 470 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Cyth1Q9QX11 398 aa16.82■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Dhtkd1A2ATU0 921 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Srsf11E9Q6E5 511 aaKnown RBP16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Dusp8O09112 663 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 LeprP48356 1162 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Zbtb14Q08376 449 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Samhd1Q60710 627 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Dnajc8Q6NZB0 253 aaKnown RBP16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Ddx55Q6ZPL9 600 aaKnown RBP16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Vmn2r43Q80Z08 845 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Fbxo44Q8BK26 255 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Slc39a13Q8BZH0 361 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Tmem132cQ8CEF9 1099 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Rassf9Q8K342 435 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 1700013H16RikQ9DAC5 291 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Piwil1Q9JMB7 862 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 PatjQ63ZW7 1834 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Ccdc152E9PX14 254 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Gm10801F7C7Q0 168 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Rpl21O09167 160 aaKnown RBP16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Timm44O35857 452 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Tgfb2P27090 414 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Fam83hQ148V8 1209 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Yipf3Q3UDR8 347 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 OcrlQ6NVF0 900 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Glra2Q7TNC8 452 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 SncaipQ99ME3 962 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Mms19Q9D071 1031 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Akt3Q9WUA6 479 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Slc26a3Q9WVC8 757 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 SisF8VQM5 1818 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Fndc3c1Q6DFV6 1356 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Lrriq4A6H6A4 596 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Ccdc170D3YXL0 722 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Gbp4Q61107 620 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Ssxb5Q6XAS2 159 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Cpa1Q7TPZ8 419 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 PreplQ8C167 725 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Tp53inp2Q8CFU8 221 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Sh2d5Q8JZW5 429 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Mcoln2Q8K595 566 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Plcb4Q91UZ1 1175 aa16.81■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Ccdc6D3YZP9 469 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Fgfr1P16092 822 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Eif3eP60229 445 aaKnown RBP16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Rpl22P67984 128 aaKnown RBP16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Nt5dc3Q3UHB1 546 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Dzip1lQ499E4 774 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Klhl17Q6TDP3 640 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Supt20hQ7TT00 530 aaKnown RBP16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Znf598Q80YR4 908 aaKnown RBP16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 PdgfcQ8CI19 345 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Bbs5Q9CZQ9 341 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Tmem81Q9D5K1 259 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Ttc7bE9Q6P5 843 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Sstr3P30935 428 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Cops2P61202 443 aaKnown RBP16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 GmncQ3URY2 333 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Pik3r5Q5SW28 871 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 PterQ60866 349 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 CpQ61147 1061 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Txndc8Q69AB2 127 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Polr2bQ8CFI7 1174 aaKnown RBP16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Lrrc8cQ8R502 803 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Rnf112Q96DY5 654 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Usp26Q99MX1 835 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 PrccQ9EQC8 491 aaKnown RBP16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Dgcr8Q9EQM6 773 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Clcn2Q9R0A1 908 aa16.8■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Mmp13P33435 472 aa16.79■□□□□ 0.28
Ckap4-201ENSMUST00000053871 BtkP35991 659 aa16.79■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Znf112Q0VAW7 879 aa16.79■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Olfm4Q3UZZ4 505 aa16.79■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Sh3rf1Q69ZI1 892 aa16.79■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Zfp943Q6NZP4 507 aa16.79■□□□□ 0.28
Ckap4-201ENSMUST00000053871 Lsm8Q6ZWM4 96 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms