RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Anapc7Q9WVM3 565 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cntnap4Q99P47 1310 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 ThadaA8C756 1938 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 0610012G03RikA0A0J9YTR2 95 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Foxp2P58463 714 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fermt1P59113 677 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gpatch2lQ6PE65 482 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 HpseQ6YGZ1 535 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fam102aQ78T81 392 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tubb2aQ7TMM9 445 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Polr2eQ80UW8 210 aaKnown RBP9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ints6lQ8BND4 861 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Kank2Q8BX02 843 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tp53inp2Q8CFU8 221 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Glis1Q8K1M4 789 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rxfp2Q91ZZ5 737 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Thap12Q9CUX1 758 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tubb2bQ9CWF2 445 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ndufaf7Q9CWG8 436 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Chordc1Q9D1P4 331 aaKnown RBP9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Dusp6Q9DBB1 381 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mkrn2Q9ERV1 416 aaKnown RBP9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ddx24Q9ESV0 857 aaKnown RBP9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm13276A0A087WR18 182 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm6657A0A1B0GRJ3 277 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Supt3B0QZW4 406 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tmem265E9Q8G3 109 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm3371F7CQW8 167 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 DffaO54786 331 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Klra1P20937 262 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pde6bP23440 856 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tsta3P23591 321 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Usp10P52479 792 aaKnown RBP9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Hdhd2Q3UGR5 259 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Parp3Q3ULW8 533 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tsr1Q5SWD9 803 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tcf4Q60722 670 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Spag5Q7TME2 1165 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Cyth4Q80YW0 393 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rassf10Q8BL43 508 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Pyhin1Q8BV49 420 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gpc5Q8CAL5 572 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ccdc28aQ8CEI3 192 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 B3galt6Q91Z92 325 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Lonp2Q9DBN5 852 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Trhr2Q9ERT2 382 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Piwil1Q9JMB7 862 aa9.2□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rsrc2A2RTL5 376 aaKnown RBP9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Bcl7cO08664 217 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Stk10O55098 966 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ptp4a2O70274 167 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mybl1P51960 751 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Rbm20Q3UQS8 1199 aaKnown RBP9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ctc1Q5SUQ9 1212 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Traf3Q60803 567 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 EsrrbQ61539 433 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 RetsatQ64FW2 609 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Znf512Q69Z99 562 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gpsm1Q6IR34 673 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Camta2Q80Y50 1208 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tmem209Q8BRG8 561 aaKnown RBP9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Clec1aQ8BWY2 269 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Kif2bQ8C0N1 668 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Dis3lQ8C0S1 1053 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fermt3Q8K1B8 665 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mcoln2Q8K595 566 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Scgb2b20Q9JI02 112 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ighv11-2A0A075B5R8 117 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Veph1A1A535 833 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm3182K7N6T8 263 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Krt19P19001 403 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Zfp251Q6PCX8 632 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Lsm8Q6ZWM4 96 aaKnown RBP9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 WtipQ7TQJ8 398 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Spata7Q80VP2 582 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Gm5622Q810Q0 167 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Slc2a12Q8BFW9 622 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Usp38Q8BW70 1042 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Fam118bQ8C569 351 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Tmem132cQ8CEF9 1099 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Smtnl2Q8CI12 456 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 LgsnQ8CIX8 563 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 CmasQ99KK2 432 aaKnown RBP9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ttc33Q9D6K7 262 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Dnajb4Q9D832 337 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Xab2Q9DCD2 855 aaKnown RBP9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 DgkeQ9R1C6 564 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ptgdr2Q9Z2J6 382 aa9.19□□□□□ -0.94
Trim39-201ENSMUST00000042717 Ccl26F8VQM2 93 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Nr3c1P06537 783 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 AlbP07724 608 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Lmnb2P21619 596 aaKnown RBP9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 IvlP48997 467 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Mxi1P50540 228 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 IhhP97812 411 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Col19a1Q0VF58 1136 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Q3UE31 404 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Vav2Q60992 868 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 PostnQ62009 838 aa9.18□□□□□ -0.94
Trim39-201ENSMUST00000042717 Nr2e1Q64104 385 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms