RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Apol11aE9PZG0 334 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Kbtbd2G3X9X1 623 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Cdk14O35495 469 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Mmp13P33435 472 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 LmnaP48678 665 aaKnown RBP11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Hspa4lP48722 838 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Mxd1P50538 227 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Polr1bP70700 1135 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Vars2Q3U2A8 1060 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ccdc51Q3URS9 406 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ankrd34bQ3UUF8 508 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 WhammQ571B6 793 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Srrm3Q80WV7 648 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Snip1Q8BIZ6 383 aaKnown RBP11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Cops7bQ8BV13 264 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Mill1Q8HWE7 395 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Lima1Q9ERG0 753 aaKnown RBP11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Znf609Q8BZ47 1413 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Tph1P17532 447 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 NrlP54846 237 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 VcpQ01853 806 aaKnown RBP11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 1810049J17RikQ3V2G9 153 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Olfml3Q8BK62 406 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ccdc151Q8BSN3 593 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rapgef5Q8C0Q9 814 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Onecut3Q8K557 490 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Fam49bQ921M7 324 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Slc5a5Q99PN0 618 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rilpl1Q9JJC6 406 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ccr10Q9JL21 362 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Zscan4-ps3A0A1B0GRH6 506 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Zscan4-ps2A0A1C7CYU6 506 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ccdc144bE9PVZ3 520 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 2610028H24RikG5E8K1 270 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Pdk4O70571 412 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Lmnb1P14733 588 aaKnown RBP11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Pou5f1P20263 352 aaKnown RBP11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Sox10Q04888 466 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Foxred2Q3USW5 665 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Pdp2Q504M2 532 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Pim2Q62070 370 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 DgkqQ6P5E8 934 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Zswim6Q80TB7 1207 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Smap1Q91VZ6 440 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Prkag2Q91WG5 566 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Lyrm1Q9CQB7 122 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Poc5Q9DBS8 558 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Phf2Q9WTU0 1096 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Fam171a2A2A699 822 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Pramef20B1ARV6 477 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Itga9B8JK39 1036 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Il1rapl1P59823 695 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 DselQ0VBN2 1207 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rap1gap2Q5SVL6 712 aaKnown RBP11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Il17raQ60943 864 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Jak2Q62120 1129 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Q6GQV0 436 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Zdhhc24Q6IR37 284 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 NrcamQ810U4 1256 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Stxbp5Q8K400 1152 aaKnown RBP11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Trim7Q923T7 510 aa11.14□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Duox1A2AQ92 1551 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Glt1d1A4FUP9 346 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Gm3187M0QWW3 260 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rpl21O09167 160 aaKnown RBP11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 LdhbP16125 334 aaKnown RBP11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rab21P35282 222 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ppp3caP63328 521 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Itih3Q61704 889 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ahcyl1Q80SW1 530 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Polr2bQ8CFI7 1174 aaKnown RBP11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Plac9Q8K262 108 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ces4aQ8R0W5 563 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ankrd49Q8VE42 238 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rex1bdQ9CYZ6 169 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Tekt1Q9DAJ2 418 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Grk1Q9WVL4 564 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 VarsQ9Z1Q9 1263 aaKnown RBP11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Mtmr9Q9Z2D0 545 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Plch1Q4KWH5 1682 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Cfap44E9Q5M6 1843 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ccdc153P0C7Q1 202 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Psmd7P26516 321 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Elk3P41971 409 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Rufy4Q3TYX8 563 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Lsg1Q3UM18 644 aaKnown RBP11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Shroom1Q5SX79 823 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Epha7Q61772 998 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Senp6Q6P7W0 1132 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Arhgap10Q6Y5D8 786 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Psd4Q8BLR5 1005 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Uba3Q8C878 462 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Ddx18Q8K363 660 aaKnown RBP11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Znf445Q8R2V3 986 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Wrap53Q8VC51 532 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Angel1Q8VCU0 667 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Dqx1Q924H9 718 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Eya4Q9Z191 616 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Cyp2ab1S4R196 498 aa11.13□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Golgb1E9PVZ8 3238 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms