RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Klhl17Q6TDP3 640 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dctn2Q99KJ8 402 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dynll2Q9D0M5 89 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ccdc88cQ6VGS5 2009 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm10406A6NAS4 205 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm3373A6NAS7 205 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm3298E9PW80 205 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm3667K7N757 205 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm3558Q5FWC9 205 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 R3hdm2Q80TM6 1044 aaKnown RBP14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dpp9Q8BVG4 862 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cap2Q9CYT6 476 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Acot3Q9QYR7 432 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Atp7bQ64446 1462 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Iqgap1Q9JKF1 1657 aaKnown RBP14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cdr2lA2A6T1 465 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rgs2O08849 211 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rgs16P97428 201 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ankmy2Q3TPE9 440 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Qrich1Q3UA37 777 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 TsnQ62348 228 aaKnown RBP14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 MregQ6NVG5 214 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tdpoz4Q6YCH2 370 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rhpn2Q8BWR8 686 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dnajc28Q8VCE1 385 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cnga3Q9JJZ8 631 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gm29554A0A087WNW4 188 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Pcna-ps2A0A140T8V5 261 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Stat3P42227 770 aaKnown RBP14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Otud6aQ6IE21 290 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mettl25Q6NXH8 597 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 GanQ8CA72 597 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tmem161aQ8VCA6 480 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 NgrnQ99KS2 293 aaKnown RBP14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gprc5dQ9JIL6 344 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Hao1Q9WU19 370 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Mucl2P02815 138 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Hoxc10P31257 342 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cep78Q6IRU7 790 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ifi44Q8BV66 422 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tmem154Q8C4Q9 181 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Kank3Q9Z1P7 791 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Serpinh1P19324 417 aaKnown RBP14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Dnal1Q05A62 190 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tmem26Q3UP23 366 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tmprss11aQ3UQ41 389 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Fam228bQ497Q6 232 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tab3Q571K4 716 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tlr13Q6R5N8 991 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tgm5Q9D7I9 724 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tnfrsf21Q9EPU5 655 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 CntrlA2AL36 2334 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Cyp3a59D3Z2W7 503 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 CblP22682 913 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 LvrnQ2KHK3 559 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rnpc3Q3UZ01 514 aaKnown RBP14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Smarca1Q6PGB8 1046 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Slc38a7Q8BWH0 463 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Plekhg6Q8R0J1 787 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Chst15Q91XQ5 561 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 M1apQ9Z0E1 529 aa14.48□□□□□ -0.09
Col5a1-201ENSMUST00000028280 ItgaeQ60677 1167 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Teddm1bQ8CC62 306 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gtf2h3Q8VD76 309 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rev1Q920Q2 1249 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tagln3Q9R1Q8 199 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Kiaa1107Q80TK0 1369 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 GclcP97494 637 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Pou1f1Q00286 291 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rabl6Q5U3K5 725 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Adgrg6Q6F3F9 1165 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Lrfn2Q80TG9 788 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Stard7Q8R1R3 373 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Gramd1aQ8VEF1 722 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Kdm4bQ91VY5 1086 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Sf3b1Q99NB9 1304 aaKnown RBP14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Kdm6bQ5NCY0 1641 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Zfp266E9Q2S7 604 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Klf6O08584 283 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Traf2P39429 501 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Prox1P48437 737 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Hsd17b4P51660 735 aaKnown RBP14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ttbk2Q3UVR3 1243 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Lilrb4Q64281 335 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Q8C6G1 249 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Pcdha5Q91Y15 934 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rmnd5bQ91YQ7 393 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Klra8Q60682 266 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Fam167aQ6P1G6 215 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Brd8Q8R3B7 951 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Nudt12Q9DCN1 462 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Myo3aQ8K3H5 1613 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Tpst1O70281 370 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Aco1P28271 889 aaKnown RBP14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Scd4Q6T707 353 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Ssxb5Q6XAS2 159 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Eif3lQ8QZY1 564 aaKnown RBP14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Taldo1Q93092 337 aa14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Rprd1bQ9CSU0 326 aaKnown RBP14.47□□□□□ -0.09
Col5a1-201ENSMUST00000028280 Echdc3Q9D7J9 300 aa14.47□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms