RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Chrna3Q8R4G9 499 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Atp1a1Q8VDN2 1023 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pcdha9Q91Y11 979 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Q922C1 641 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Emc3Q99KI3 261 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pard3bQ9CSB4 1203 aa4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PfkpQ9WUA3 784 aaKnown RBP4.75□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm28897A0A087WP44 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Akr1b10G5E895 316 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 S100a1P56565 94 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 CiitaP79621 1155 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Mdh1bQ5F204 500 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 FcgrtQ61559 365 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 MregQ6NVG5 214 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 TwistnbQ78WZ7 330 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sp8Q8BMJ8 486 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sfrp1Q8C4U3 314 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ddx18Q8K363 660 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dph5Q9CWQ0 281 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cpb2Q9JHH6 422 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dkk3Q9QUN9 349 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fyb2A2A995 729 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Tceal7A3KGA4 98 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PotegA5H0M4 473 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Zfp266E9Q2S7 604 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 P4hbP09103 509 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cdc25cP48967 447 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Capn11Q6J756 714 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gemin4Q6P6L6 1058 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ireb2Q811J3 963 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ubap1Q8BH48 502 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Q8BWQ6 963 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 CenpxQ8C4X1 78 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 DnerQ8JZM4 737 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PiguQ8K358 434 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 TbccQ8VCN9 341 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Coa7Q921H9 231 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Far1Q922J9 515 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lztr1Q9CQ33 837 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 CpvlQ9D3S9 478 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Dctn3Q9Z0Y1 186 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fam205aA2APU8 1308 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Krt83E9Q1Y9 479 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm5814J3QP80 125 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rfpl4bJ3QPR6 266 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Stat3P42227 770 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Shox2P70390 331 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Znf879Q8BI99 563 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ints5Q8CHT3 1018 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 TgdsQ8VDR7 355 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 PappaQ8R4K8 1624 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm29276A0A087WNW5 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm21117A0A087WPJ9 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm20820A0A087WPP3 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm20937A0A087WQA3 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm21258A0A087WQC7 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm28102A0A087WQL3 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm21095A0A087WR14 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm20792A0A087WRF5 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm21865A0A087WRL2 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm28576A0A087WRP6 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm28490A0A087WRT9 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm21294A0A087WS79 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm20824A0A087WS97 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm21996A0A087WSS9 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm28870A0A0A6YW38 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm29866A0A0A6YX04 222 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 A0A1Y7VML8 143 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cyp2c23E9Q5K4 494 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm8257E9Q8R3 264 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slc1a2P43006 572 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rpl19P84099 196 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Serping1P97290 504 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ezh2Q61188 746 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ugt1a1Q63886 535 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Krt42Q6IFX2 452 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rbm12b1Q80YR9 836 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm21627Q810R0 219 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Stx5Q8K1E0 355 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gramd1aQ8VEF1 722 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Trpv6Q91WD2 767 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 FtcdQ91XD4 541 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Atp6v1b1Q91YH6 513 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Pls3Q99K51 630 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 4930513O06RikQ9D549 161 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Rpap3Q9D706 660 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Sipa1l2Q80TE4 1722 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Gm13084A2A8N0 494 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Zfp174B9EJW5 407 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 RalaP63321 206 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Q3TTJ4 293 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Klra3Q64329 266 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cyp3a13Q64464 503 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Cpa1Q7TPZ8 419 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Ano4Q8C5H1 955 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Fam32aQ9CR80 112 aaKnown RBP4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 DohhA0A1Y7VJ29 135 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Lrriq4A6H6A4 596 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 S100a13P97352 98 aa4.74□□□□□ -1.65
Prkdc-201ENSMUST00000023352 Slc26a2Q62273 739 aa4.74□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms