RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W YER181CP40097 107 aa2.26□□□□□ -2.05
HSH49YOR319W NSE4P43124 402 aa2.26□□□□□ -2.05
HSH49YOR319W YJR015WP47090 510 aa2.26□□□□□ -2.05
HSH49YOR319W CCC1P47818 322 aa2.26□□□□□ -2.05
HSH49YOR319W PAC10P48363 199 aa2.26□□□□□ -2.05
HSH49YOR319W RBL2P48606 106 aaKnown RBP2.26□□□□□ -2.05
HSH49YOR319W LIP1Q03579 150 aa2.26□□□□□ -2.05
HSH49YOR319W HTD2P38790 280 aaKnown RBP2.25□□□□□ -2.05
HSH49YOR319W YNR064CP53750 290 aa2.25□□□□□ -2.05
HSH49YOR319W YDR102CQ03864 110 aa2.25□□□□□ -2.05
HSH49YOR319W UPS3Q04006 179 aa2.25□□□□□ -2.05
HSH49YOR319W RIM9Q04734 239 aa2.25□□□□□ -2.05
HSH49YOR319W UPS1Q05776 175 aa2.25□□□□□ -2.05
HSH49YOR319W YLR162WQ06235 118 aa2.25□□□□□ -2.05
HSH49YOR319W ATG41Q12048 136 aa2.25□□□□□ -2.05
HSH49YOR319W DUR1,2P32528 1835 aaKnown RBP2.24□□□□□ -2.05
HSH49YOR319W MSB2P32334 1306 aa2.24□□□□□ -2.05
HSH49YOR319W ALB1P47019 175 aaPredicted RBP2.24□□□□□ -2.05
HSH49YOR319W YGL193CP53097 103 aa2.24□□□□□ -2.05
HSH49YOR319W HRD1Q08109 551 aa2.24□□□□□ -2.05
HSH49YOR319W PST2Q12335 198 aaKnown RBP2.24□□□□□ -2.05
HSH49YOR319W YOL162WP0CF19 215 aa2.23□□□□□ -2.05
HSH49YOR319W PHO13P19881 312 aa2.23□□□□□ -2.05
HSH49YOR319W MAK31P23059 88 aa2.23□□□□□ -2.05
HSH49YOR319W YHP1Q04116 353 aa2.23□□□□□ -2.05
HSH49YOR319W ATG10Q07879 167 aa2.23□□□□□ -2.05
HSH49YOR319W FIT2Q08906 153 aa2.23□□□□□ -2.05
HSH49YOR319W STF2P16965 84 aa2.22□□□□□ -2.05
HSH49YOR319W POP7P38291 140 aa2.22□□□□□ -2.05
HSH49YOR319W RPL13BP40212 199 aaKnown RBP2.22□□□□□ -2.05
HSH49YOR319W MOB1P40484 314 aa2.22□□□□□ -2.05
HSH49YOR319W YGR201CP42936 225 aa2.22□□□□□ -2.05
HSH49YOR319W YML079WQ03629 201 aa2.22□□□□□ -2.05
HSH49YOR319W SPC2Q04969 178 aa2.22□□□□□ -2.05
HSH49YOR319W YPR114WQ06107 315 aa2.22□□□□□ -2.05
HSH49YOR319W RPL13AQ12690 199 aaPredicted RBP2.22□□□□□ -2.05
HSH49YOR319W RPC19P28000 142 aaKnown RBP2.21□□□□□ -2.06
HSH49YOR319W MRPL24P36525 258 aaPredicted RBP2.21□□□□□ -2.06
HSH49YOR319W YPT31P38555 223 aaKnown RBP2.21□□□□□ -2.06
HSH49YOR319W HPA3P39979 161 aa2.21□□□□□ -2.06
HSH49YOR319W GIM4P40005 111 aaKnown RBP2.21□□□□□ -2.06
HSH49YOR319W YGR042WP53227 271 aa2.21□□□□□ -2.06
HSH49YOR319W YMR320WQ04897 101 aa2.21□□□□□ -2.06
HSH49YOR319W CSI2Q08054 341 aa2.21□□□□□ -2.06
HSH49YOR319W UIP4Q08926 304 aa2.21□□□□□ -2.06
HSH49YOR319W GPA2P10823 449 aa2.2□□□□□ -2.06
HSH49YOR319W YGL010WP25338 174 aa2.2□□□□□ -2.06
HSH49YOR319W RPB7P34087 171 aa2.2□□□□□ -2.06
HSH49YOR319W CCS1P40202 249 aaKnown RBP2.2□□□□□ -2.06
HSH49YOR319W MPM1P40364 252 aa2.2□□□□□ -2.06
HSH49YOR319W FLX1P40464 311 aa2.2□□□□□ -2.06
HSH49YOR319W YJL218WP40892 196 aaKnown RBP2.2□□□□□ -2.06
HSH49YOR319W YDR366CP87287 132 aa2.2□□□□□ -2.06
HSH49YOR319W CSN9Q03981 162 aa2.2□□□□□ -2.06
HSH49YOR319W YMR030W-AQ3E760 96 aa2.2□□□□□ -2.06
HSH49YOR319W SPA2P23201 1466 aaKnown RBP2.2□□□□□ -2.06
HSH49YOR319W CYR1P08678 2026 aaKnown RBP2.19□□□□□ -2.06
HSH49YOR319W SPS2P08459 502 aa2.19□□□□□ -2.06
HSH49YOR319W INO4P13902 151 aa2.19□□□□□ -2.06
HSH49YOR319W CYC2P38909 366 aa2.19□□□□□ -2.06
HSH49YOR319W YAE1P47118 141 aaPredicted RBP2.19□□□□□ -2.06
HSH49YOR319W YGL204CP53089 101 aa2.19□□□□□ -2.06
HSH49YOR319W RCE1Q03530 315 aa2.19□□□□□ -2.06
HSH49YOR319W SPT14P32363 452 aa2.18□□□□□ -2.06
HSH49YOR319W YBL010CP32788 280 aa2.18□□□□□ -2.06
HSH49YOR319W YGR269WP40326 108 aa2.18□□□□□ -2.06
HSH49YOR319W HYR1P40581 163 aaKnown RBP2.18□□□□□ -2.06
HSH49YOR319W PHB1P40961 287 aa2.18□□□□□ -2.06
HSH49YOR319W HHO1P53551 258 aa2.18□□□□□ -2.06
HSH49YOR319W COF1Q03048 143 aaKnown RBP2.18□□□□□ -2.06
HSH49YOR319W QCR8P08525 94 aa2.17□□□□□ -2.06
HSH49YOR319W YEL067CP39978 195 aa2.17□□□□□ -2.06
HSH49YOR319W GPI2P46961 280 aa2.17□□□□□ -2.06
HSH49YOR319W YGR039WP53225 103 aa2.17□□□□□ -2.06
HSH49YOR319W CWC27Q02770 301 aa2.17□□□□□ -2.06
HSH49YOR319W RRT7Q07829 113 aa2.17□□□□□ -2.06
HSH49YOR319W DDR48P18899 430 aaKnown RBP2.16□□□□□ -2.06
HSH49YOR319W MRS4P23500 304 aa2.16□□□□□ -2.06
HSH49YOR319W BAT2P47176 376 aaKnown RBP2.16□□□□□ -2.06
HSH49YOR319W EST3Q03096 181 aa2.16□□□□□ -2.06
HSH49YOR319W ELP6Q04868 273 aa2.16□□□□□ -2.06
HSH49YOR319W YDL157CQ12082 118 aa2.16□□□□□ -2.06
HSH49YOR319W YNL146C-AQ3E7Z1 64 aa2.16□□□□□ -2.06
HSH49YOR319W ADE6P38972 1358 aaKnown RBP2.15□□□□□ -2.07
HSH49YOR319W HSP12P22943 109 aaKnown RBP2.15□□□□□ -2.07
HSH49YOR319W SRP21P32342 167 aa2.15□□□□□ -2.07
HSH49YOR319W SUI1P32911 108 aaKnown RBP2.15□□□□□ -2.07
HSH49YOR319W SEN2P16658 377 aa2.14□□□□□ -2.07
HSH49YOR319W CIN5P40917 295 aa2.14□□□□□ -2.07
HSH49YOR319W GEP7P53171 287 aa2.14□□□□□ -2.07
HSH49YOR319W ATP19P81451 68 aa2.14□□□□□ -2.07
HSH49YOR319W YMR252CQ04814 134 aa2.14□□□□□ -2.07
HSH49YOR319W SCS22Q6Q595 175 aa2.14□□□□□ -2.07
HSH49YOR319W RIB3Q99258 208 aa2.14□□□□□ -2.07
HSH49YOR319W AHT1P29589 182 aa2.13□□□□□ -2.07
HSH49YOR319W SHB17P36136 271 aaKnown RBP2.13□□□□□ -2.07
HSH49YOR319W YHL042WP38729 150 aa2.13□□□□□ -2.07
HSH49YOR319W UBC7Q02159 165 aa2.13□□□□□ -2.07
HSH49YOR319W MET31Q03081 177 aa2.13□□□□□ -2.07
HSH49YOR319W MZM1Q03429 123 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 105.7 ms