RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C SUA7P29055 345 aaPredicted RBP4.43□□□□□ -1.7
RAT1YOR048C ZRT1P32804 376 aa4.43□□□□□ -1.7
RAT1YOR048C YKR073CP36153 106 aa4.43□□□□□ -1.7
RAT1YOR048C LPP1Q04396 274 aa4.43□□□□□ -1.7
RAT1YOR048C YLR179CQ06252 201 aaKnown RBP4.43□□□□□ -1.7
RAT1YOR048C ERF2Q06551 359 aa4.43□□□□□ -1.7
RAT1YOR048C AFR1P33304 620 aa4.43□□□□□ -1.7
RAT1YOR048C CTR2P38865 189 aa4.43□□□□□ -1.7
RAT1YOR048C SUR2P38992 349 aa4.43□□□□□ -1.7
RAT1YOR048C RPS26AP39938 119 aaKnown RBP4.43□□□□□ -1.7
RAT1YOR048C RPS26BP39939 119 aaKnown RBP4.43□□□□□ -1.7
RAT1YOR048C YMR141CP40211 102 aa4.43□□□□□ -1.7
RAT1YOR048C MIC27P50945 234 aa4.43□□□□□ -1.7
RAT1YOR048C YDR209CQ03480 137 aa4.43□□□□□ -1.7
RAT1YOR048C RFU1Q08003 200 aa4.43□□□□□ -1.7
RAT1YOR048C HNT3Q08702 217 aa4.43□□□□□ -1.7
RAT1YOR048C TCA17P32613 152 aa4.42□□□□□ -1.7
RAT1YOR048C YKL187CP34231 750 aa4.42□□□□□ -1.7
RAT1YOR048C ELF1P36053 145 aa4.42□□□□□ -1.7
RAT1YOR048C SAS2P40963 338 aa4.42□□□□□ -1.7
RAT1YOR048C CWC27Q02770 301 aa4.42□□□□□ -1.7
RAT1YOR048C HED1Q03937 162 aa4.42□□□□□ -1.7
RAT1YOR048C IRC23Q08416 157 aa4.42□□□□□ -1.7
RAT1YOR048C YDR215CQ12240 137 aa4.42□□□□□ -1.7
RAT1YOR048C BOL1Q3E793 110 aa4.42□□□□□ -1.7
RAT1YOR048C COA6Q3E846 104 aa4.42□□□□□ -1.7
RAT1YOR048C CDC26P14724 124 aa4.42□□□□□ -1.7
RAT1YOR048C NUD1P32336 851 aa4.42□□□□□ -1.7
RAT1YOR048C UIP3P39547 235 aa4.42□□□□□ -1.7
RAT1YOR048C PRE5P40302 234 aaKnown RBP4.42□□□□□ -1.7
RAT1YOR048C PIR5P46999 287 aa4.42□□□□□ -1.7
RAT1YOR048C YDR391CQ04170 232 aa4.42□□□□□ -1.7
RAT1YOR048C ERG8P24521 451 aa4.41□□□□□ -1.7
RAT1YOR048C YKL075CP36083 450 aa4.41□□□□□ -1.7
RAT1YOR048C SNU13P39990 126 aaKnown RBP4.41□□□□□ -1.7
RAT1YOR048C EGT2P42835 1041 aa4.41□□□□□ -1.7
RAT1YOR048C YOL029CQ08187 201 aa4.41□□□□□ -1.7
RAT1YOR048C YDL085C-AQ3E7B7 68 aaKnown RBP4.41□□□□□ -1.7
RAT1YOR048C SFT2P38166 215 aa4.41□□□□□ -1.7
RAT1YOR048C YDR366CP87287 132 aa4.41□□□□□ -1.7
RAT1YOR048C MCH1Q07376 486 aa4.41□□□□□ -1.7
RAT1YOR048C RPL23AP0CX41 137 aaKnown RBP4.4□□□□□ -1.7
RAT1YOR048C RPL23BP0CX42 137 aaKnown RBP4.4□□□□□ -1.7
RAT1YOR048C RAD23P32628 398 aaKnown RBP4.4□□□□□ -1.7
RAT1YOR048C GPI2P46961 280 aa4.4□□□□□ -1.7
RAT1YOR048C YGR017WP53210 297 aa4.4□□□□□ -1.7
RAT1YOR048C COX18P53239 316 aa4.4□□□□□ -1.7
RAT1YOR048C ATP5P09457 212 aa4.4□□□□□ -1.71
RAT1YOR048C RPL35AP0CX84 120 aaKnown RBP4.4□□□□□ -1.71
RAT1YOR048C RPL35BP0CX85 120 aaKnown RBP4.4□□□□□ -1.71
RAT1YOR048C MIX23P38162 196 aa4.4□□□□□ -1.71
RAT1YOR048C YHR138CP38841 114 aaPredicted RBP4.4□□□□□ -1.71
RAT1YOR048C YDL183CP48569 320 aa4.4□□□□□ -1.71
RAT1YOR048C BOR1P53838 576 aa4.4□□□□□ -1.71
RAT1YOR048C FCY1Q12178 158 aa4.4□□□□□ -1.71
RAT1YOR048C RPS22AP0C0W1 130 aaKnown RBP4.4□□□□□ -1.71
RAT1YOR048C HAP3P13434 144 aa4.4□□□□□ -1.71
RAT1YOR048C RPB11P38902 120 aa4.4□□□□□ -1.71
RAT1YOR048C BDH1P39714 382 aa4.4□□□□□ -1.71
RAT1YOR048C RPA43P46669 326 aa4.4□□□□□ -1.71
RAT1YOR048C IRC25Q07951 179 aa4.4□□□□□ -1.71
RAT1YOR048C ATO3Q12359 275 aa4.4□□□□□ -1.71
RAT1YOR048C YDR157WA0A023PZE8 133 aa4.39□□□□□ -1.71
RAT1YOR048C ICS2P38284 255 aa4.39□□□□□ -1.71
RAT1YOR048C BNA2P47125 453 aa4.39□□□□□ -1.71
RAT1YOR048C RPL15BP54780 204 aaPredicted RBP4.39□□□□□ -1.71
RAT1YOR048C RRS1Q08746 203 aaKnown RBP4.39□□□□□ -1.71
RAT1YOR048C YPT1P01123 206 aaKnown RBP4.39□□□□□ -1.71
RAT1YOR048C SEC11P15367 167 aa4.39□□□□□ -1.71
RAT1YOR048C DOG1P38774 246 aa4.39□□□□□ -1.71
RAT1YOR048C PRM5P40476 318 aa4.39□□□□□ -1.71
RAT1YOR048C YFR045WP43617 309 aa4.39□□□□□ -1.71
RAT1YOR048C SIP18P50263 79 aa4.39□□□□□ -1.71
RAT1YOR048C YGR151CP53287 111 aa4.39□□□□□ -1.71
RAT1YOR048C SWT21P53873 357 aaPredicted RBP4.39□□□□□ -1.71
RAT1YOR048C YDC1Q02896 317 aa4.39□□□□□ -1.71
RAT1YOR048C YMR105W-AQ8TGS8 64 aa4.39□□□□□ -1.71
RAT1YOR048C ADH2P00331 348 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C PIS1P06197 220 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C YDL218WQ07629 317 aa4.38□□□□□ -1.71
RAT1YOR048C YLR050CQ12155 161 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C DAL82P21705 255 aa4.38□□□□□ -1.71
RAT1YOR048C ALG14P38242 237 aa4.38□□□□□ -1.71
RAT1YOR048C YFL051CP43552 160 aa4.38□□□□□ -1.71
RAT1YOR048C WWM1P43582 211 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C THG1P53215 237 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C YNL234WP53857 426 aa4.38□□□□□ -1.71
RAT1YOR048C GIM5Q04493 163 aa4.38□□□□□ -1.71
RAT1YOR048C UTP23Q12339 254 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C HTB1P02293 131 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C UTR5P32630 166 aa4.38□□□□□ -1.71
RAT1YOR048C YKR045CP36138 183 aa4.38□□□□□ -1.71
RAT1YOR048C LST8P41318 303 aa4.38□□□□□ -1.71
RAT1YOR048C YGR025WP53216 100 aa4.38□□□□□ -1.71
RAT1YOR048C UPS1Q05776 175 aa4.38□□□□□ -1.71
RAT1YOR048C HRD1Q08109 551 aa4.38□□□□□ -1.71
RAT1YOR048C FSF1Q12029 327 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C RDL1Q12305 139 aaKnown RBP4.38□□□□□ -1.71
RAT1YOR048C URA2P07259 2214 aaKnown RBP4.37□□□□□ -1.71
RAT1YOR048C RPL7AP05737 244 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms