RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C YKR070WP36151 352 aaKnown RBP1.23□□□□□ -2.21
ATG16YMR159C YAR064WP39563 99 aa1.23□□□□□ -2.21
ATG16YMR159C MOB1P40484 314 aa1.23□□□□□ -2.21
ATG16YMR159C YJR015WP47090 510 aa1.23□□□□□ -2.21
ATG16YMR159C NQM1P53228 333 aaPredicted RBP1.23□□□□□ -2.21
ATG16YMR159C PLP1Q04004 230 aa1.23□□□□□ -2.21
ATG16YMR159C FMP49A0A023PZB3 126 aa1.22□□□□□ -2.21
ATG16YMR159C YML079WQ03629 201 aa1.22□□□□□ -2.21
ATG16YMR159C YLR050CQ12155 161 aaKnown RBP1.22□□□□□ -2.21
ATG16YMR159C PEX11Q12462 236 aa1.22□□□□□ -2.21
ATG16YMR159C YDC1Q02896 317 aa1.21□□□□□ -2.22
ATG16YMR159C DUR1,2P32528 1835 aaKnown RBP1.21□□□□□ -2.22
ATG16YMR159C PRE1P22141 198 aaKnown RBP1.2□□□□□ -2.22
ATG16YMR159C EGD2P38879 174 aaKnown RBP1.2□□□□□ -2.22
ATG16YMR159C KEI1Q06346 221 aa1.2□□□□□ -2.22
ATG16YMR159C RAD51P25454 400 aa1.19□□□□□ -2.22
ATG16YMR159C GRE1Q08969 168 aa1.19□□□□□ -2.22
ATG16YMR159C YDL157CQ12082 118 aa1.19□□□□□ -2.22
ATG16YMR159C TRM3Q07527 1436 aa1.18□□□□□ -2.22
ATG16YMR159C SPS2P08459 502 aa1.18□□□□□ -2.22
ATG16YMR159C YGR269WP40326 108 aa1.18□□□□□ -2.22
ATG16YMR159C YIP3P53633 176 aa1.18□□□□□ -2.22
ATG16YMR159C AVO2Q04749 426 aa1.18□□□□□ -2.22
ATG16YMR159C SYM1Q06563 197 aa1.18□□□□□ -2.22
ATG16YMR159C YEL028WP39989 153 aa1.17□□□□□ -2.22
ATG16YMR159C HRD1Q08109 551 aa1.17□□□□□ -2.22
ATG16YMR159C RPS25BP0C0T4 108 aaKnown RBP1.16□□□□□ -2.22
ATG16YMR159C SRP14P38985 146 aa1.16□□□□□ -2.22
ATG16YMR159C TMA23Q03525 211 aa1.16□□□□□ -2.22
ATG16YMR159C RPS25AQ3E792 108 aaPredicted RBP1.16□□□□□ -2.22
ATG16YMR159C CMD1P06787 147 aaKnown RBP1.15□□□□□ -2.23
ATG16YMR159C CSH1P38287 376 aa1.15□□□□□ -2.23
ATG16YMR159C LIP1Q03579 150 aa1.15□□□□□ -2.23
ATG16YMR159C THI74Q04083 370 aa1.15□□□□□ -2.23
ATG16YMR159C ATG38Q05789 226 aaKnown RBP1.15□□□□□ -2.23
ATG16YMR159C ATG10Q07879 167 aa1.15□□□□□ -2.23
ATG16YMR159C KIN28P06242 306 aa1.14□□□□□ -2.23
ATG16YMR159C YNL140CP53910 189 aa1.14□□□□□ -2.23
ATG16YMR159C HSK3P69852 69 aa1.14□□□□□ -2.23
ATG16YMR159C GLC8P41818 229 aa1.13□□□□□ -2.23
ATG16YMR159C APS3P47064 194 aa1.13□□□□□ -2.23
ATG16YMR159C FCY1Q12178 158 aa1.13□□□□□ -2.23
ATG16YMR159C INO4P13902 151 aa1.12□□□□□ -2.23
ATG16YMR159C SRP102P36057 244 aaPredicted RBP1.12□□□□□ -2.23
ATG16YMR159C RPL35AP0CX84 120 aaKnown RBP1.11□□□□□ -2.23
ATG16YMR159C RPL35BP0CX85 120 aaKnown RBP1.11□□□□□ -2.23
ATG16YMR159C YCR001WP25347 104 aa1.11□□□□□ -2.23
ATG16YMR159C GEP7P53171 287 aa1.11□□□□□ -2.23
ATG16YMR159C UIP4Q08926 304 aa1.11□□□□□ -2.23
ATG16YMR159C YPT31P38555 223 aaKnown RBP1.1□□□□□ -2.23
ATG16YMR159C TMA20P89886 181 aaPredicted RBP1.1□□□□□ -2.23
ATG16YMR159C YPR114WQ06107 315 aa1.1□□□□□ -2.23
ATG16YMR159C YOL013W-AP0C272 63 aaPredicted RBP1.09□□□□□ -2.23
ATG16YMR159C SPT14P32363 452 aa1.09□□□□□ -2.23
ATG16YMR159C UBC6P33296 250 aaPredicted RBP1.09□□□□□ -2.23
ATG16YMR159C PTC1P35182 281 aa1.09□□□□□ -2.23
ATG16YMR159C YDR102CQ03864 110 aa1.09□□□□□ -2.23
ATG16YMR159C YDL241WQ07738 123 aa1.09□□□□□ -2.23
ATG16YMR159C CIN5P40917 295 aa1.08□□□□□ -2.24
ATG16YMR159C TAF2P23255 1407 aa1.07□□□□□ -2.24
ATG16YMR159C VPS51P36116 164 aa1.06□□□□□ -2.24
ATG16YMR159C YGL101WP53144 215 aa1.06□□□□□ -2.24
ATG16YMR159C YNR064CP53750 290 aa1.06□□□□□ -2.24
ATG16YMR159C YBR027CP38220 110 aa1.05□□□□□ -2.24
ATG16YMR159C GIM5Q04493 163 aa1.05□□□□□ -2.24
ATG16YMR159C ATP5P09457 212 aa1.04□□□□□ -2.24
ATG16YMR159C YEL014CP39999 101 aa1.04□□□□□ -2.24
ATG16YMR159C VAM10Q08474 114 aa1.04□□□□□ -2.24
ATG16YMR159C HHY1P39982 102 aa1.03□□□□□ -2.24
ATG16YMR159C CCC1P47818 322 aa1.03□□□□□ -2.24
ATG16YMR159C CMC4Q3E7A9 73 aa1.03□□□□□ -2.24
ATG16YMR159C HTD2P38790 280 aaKnown RBP1.02□□□□□ -2.25
ATG16YMR159C YLR053CQ12026 108 aa1.02□□□□□ -2.25
ATG16YMR159C RDI1Q12434 202 aa1.02□□□□□ -2.25
ATG16YMR159C YHR213W-BQ8TGK1 99 aa1.02□□□□□ -2.25
ATG16YMR159C RIF1P29539 1916 aa1.01□□□□□ -2.25
ATG16YMR159C ADE6P38972 1358 aaKnown RBP1.01□□□□□ -2.25
ATG16YMR159C ECM31P38122 312 aa1.01□□□□□ -2.25
ATG16YMR159C ATG8P38182 117 aaRIP-Chip data1□□□□□ -2.25not detected
ATG16YMR159C YER121WP40076 114 aa1□□□□□ -2.25
ATG16YMR159C ORM1P53224 222 aa1□□□□□ -2.25
ATG16YMR159C LSM3P57743 89 aaKnown RBP1□□□□□ -2.25
ATG16YMR159C YLR046CQ12253 270 aa1□□□□□ -2.25
ATG16YMR159C UBI4P0CG63 381 aaKnown RBP0.99□□□□□ -2.25
ATG16YMR159C FES1P38260 290 aa0.99□□□□□ -2.25
ATG16YMR159C DLS1P40366 167 aa0.99□□□□□ -2.25
ATG16YMR159C NMA1Q06178 401 aaKnown RBP0.99□□□□□ -2.25
ATG16YMR159C MRS4P23500 304 aa0.98□□□□□ -2.25
ATG16YMR159C HSP150P32478 413 aa0.98□□□□□ -2.25
ATG16YMR159C RIB3Q99258 208 aa0.98□□□□□ -2.25
ATG16YMR159C HYP2P23301 157 aaKnown RBP0.97□□□□□ -2.25
ATG16YMR159C YNL122CP53921 115 aaPredicted RBP0.97□□□□□ -2.25
ATG16YMR159C MAK3Q03503 176 aa0.97□□□□□ -2.25
ATG16YMR159C FMN1Q03778 218 aa0.97□□□□□ -2.25
ATG16YMR159C YOR072WQ08486 104 aa0.97□□□□□ -2.25
ATG16YMR159C ROM2P51862 1356 aaKnown RBP0.96□□□□□ -2.26
ATG16YMR159C YDR476CQ03362 224 aa0.96□□□□□ -2.26
ATG16YMR159C PRM3Q08931 133 aa0.96□□□□□ -2.26
ATG16YMR159C CHD1P32657 1468 aa0.95□□□□□ -2.26
ATG16YMR159C SRP21P32342 167 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms