RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YPR013CQ12145 317 aa1.34□□□□□ -2.19
ATG38YLR211C SRP21P32342 167 aa1.33□□□□□ -2.2
ATG38YLR211C YBR209WP38311 105 aa1.33□□□□□ -2.2
ATG38YLR211C TRS20P38334 175 aa1.33□□□□□ -2.2
ATG38YLR211C YHR140WP38842 239 aa1.33□□□□□ -2.2
ATG38YLR211C YEL073CP39974 107 aa1.33□□□□□ -2.2
ATG38YLR211C GLC8P41818 229 aa1.33□□□□□ -2.2
ATG38YLR211C KNH1P50112 268 aa1.33□□□□□ -2.2
ATG38YLR211C ERG25P53045 309 aa1.33□□□□□ -2.2
ATG38YLR211C PIR1Q03178 341 aa1.33□□□□□ -2.2
ATG38YLR211C LIP1Q03579 150 aa1.33□□□□□ -2.2
ATG38YLR211C SPC3Q12133 184 aa1.33□□□□□ -2.2
ATG38YLR211C RAD50P12753 1312 aa1.33□□□□□ -2.2
ATG38YLR211C DDI2P0CH63 225 aa1.32□□□□□ -2.2
ATG38YLR211C DDI3P0CH64 225 aa1.32□□□□□ -2.2
ATG38YLR211C SEC11P15367 167 aa1.32□□□□□ -2.2
ATG38YLR211C RPS20P38701 121 aaKnown RBP1.32□□□□□ -2.2
ATG38YLR211C YGR039WP53225 103 aa1.32□□□□□ -2.2
ATG38YLR211C SAY1P53324 424 aa1.32□□□□□ -2.2
ATG38YLR211C RCF2P53721 224 aa1.32□□□□□ -2.2
ATG38YLR211C YNR064CP53750 290 aa1.32□□□□□ -2.2
ATG38YLR211C EST3Q03096 181 aa1.32□□□□□ -2.2
ATG38YLR211C YDR102CQ03864 110 aa1.32□□□□□ -2.2
ATG38YLR211C FCY1Q12178 158 aa1.32□□□□□ -2.2
ATG38YLR211C YOR381W-AQ3E804 55 aa1.32□□□□□ -2.2
ATG38YLR211C YLR422WQ06409 1932 aa1.31□□□□□ -2.2
ATG38YLR211C COX8P04039 78 aa1.31□□□□□ -2.2
ATG38YLR211C YOL162WP0CF19 215 aa1.31□□□□□ -2.2
ATG38YLR211C PHO85P17157 305 aa1.31□□□□□ -2.2
ATG38YLR211C MRS4P23500 304 aa1.31□□□□□ -2.2
ATG38YLR211C GSP2P32836 220 aaKnown RBP1.31□□□□□ -2.2
ATG38YLR211C SUI1P32911 108 aaKnown RBP1.31□□□□□ -2.2
ATG38YLR211C YRA2P36036 203 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
ATG38YLR211C YHL018WP38744 120 aaPredicted RBP1.31□□□□□ -2.2
ATG38YLR211C SVP26P38869 228 aa1.31□□□□□ -2.2
ATG38YLR211C YEL067CP39978 195 aa1.31□□□□□ -2.2
ATG38YLR211C POP3P53833 195 aaPredicted RBP1.31□□□□□ -2.2
ATG38YLR211C DAD3P69850 94 aa1.31□□□□□ -2.2
ATG38YLR211C BUD25P85052 153 aa1.31□□□□□ -2.2
ATG38YLR211C UPS3Q04006 179 aa1.31□□□□□ -2.2
ATG38YLR211C SPC24Q04477 213 aa1.31□□□□□ -2.2
ATG38YLR211C SML1Q04964 104 aa1.31□□□□□ -2.2
ATG38YLR211C UPS1Q05776 175 aa1.31□□□□□ -2.2
ATG38YLR211C YPR114WQ06107 315 aa1.31□□□□□ -2.2
ATG38YLR211C ANT1Q06497 328 aa1.31□□□□□ -2.2
ATG38YLR211C YPR174CQ06616 221 aaPredicted RBP1.31□□□□□ -2.2
ATG38YLR211C PRP11Q07350 266 aaPredicted RBP1.31□□□□□ -2.2
ATG38YLR211C YPD1Q07688 167 aa1.31□□□□□ -2.2
ATG38YLR211C FIT2Q08906 153 aa1.31□□□□□ -2.2
ATG38YLR211C ATG41Q12048 136 aa1.31□□□□□ -2.2
ATG38YLR211C FAS1P07149 2051 aaKnown RBP1.31□□□□□ -2.2
ATG38YLR211C ECM5Q03214 1411 aa1.31□□□□□ -2.2
ATG38YLR211C SPA2P23201 1466 aaKnown RBP1.31□□□□□ -2.2
ATG38YLR211C HSP12P22943 109 aaKnown RBP1.3□□□□□ -2.2
ATG38YLR211C AHT1P29589 182 aa1.3□□□□□ -2.2
ATG38YLR211C SHB17P36136 271 aaKnown RBP1.3□□□□□ -2.2
ATG38YLR211C YKR045CP36138 183 aa1.3□□□□□ -2.2
ATG38YLR211C CIN5P40917 295 aa1.3□□□□□ -2.2
ATG38YLR211C DML1Q03652 475 aa1.3□□□□□ -2.2
ATG38YLR211C YDL241WQ07738 123 aa1.3□□□□□ -2.2
ATG38YLR211C UIP4Q08926 304 aa1.3□□□□□ -2.2
ATG38YLR211C YOR015WQ12169 119 aa1.3□□□□□ -2.2
ATG38YLR211C SLO1Q3E784 85 aa1.3□□□□□ -2.2
ATG38YLR211C FLO9P39712 1322 aa1.3□□□□□ -2.2
ATG38YLR211C SEN2P16658 377 aa1.29□□□□□ -2.2
ATG38YLR211C DDR48P18899 430 aaKnown RBP1.29□□□□□ -2.2
ATG38YLR211C TFC1P32367 649 aa1.29□□□□□ -2.2
ATG38YLR211C YPT31P38555 223 aaKnown RBP1.29□□□□□ -2.2
ATG38YLR211C DSE2P38844 325 aa1.29□□□□□ -2.2
ATG38YLR211C PEP8P40335 379 aa1.29□□□□□ -2.2
ATG38YLR211C NSE4P43124 402 aa1.29□□□□□ -2.2
ATG38YLR211C GEP7P53171 287 aa1.29□□□□□ -2.2
ATG38YLR211C THG1P53215 237 aaKnown RBP1.29□□□□□ -2.2
ATG38YLR211C YNL277W-AQ3E7Z0 62 aa1.29□□□□□ -2.2
ATG38YLR211C FMP49A0A023PZB3 126 aa1.28□□□□□ -2.2
ATG38YLR211C GPA2P10823 449 aa1.28□□□□□ -2.2
ATG38YLR211C MDH2P22133 377 aa1.28□□□□□ -2.2
ATG38YLR211C RPC19P28000 142 aaKnown RBP1.28□□□□□ -2.2
ATG38YLR211C RPS1AP33442 255 aaKnown RBP1.28□□□□□ -2.2
ATG38YLR211C YKR070WP36151 352 aaKnown RBP1.28□□□□□ -2.2
ATG38YLR211C HPM1P40481 377 aa1.28□□□□□ -2.2
ATG38YLR211C MOB1P40484 314 aa1.28□□□□□ -2.2
ATG38YLR211C SFT1P43682 97 aa1.28□□□□□ -2.2
ATG38YLR211C PAC10P48363 199 aa1.28□□□□□ -2.2
ATG38YLR211C YNL019CP53975 284 aa1.28□□□□□ -2.2
ATG38YLR211C GRX5Q02784 150 aa1.28□□□□□ -2.2
ATG38YLR211C YHP1Q04116 353 aa1.28□□□□□ -2.2
ATG38YLR211C CNL1Q06333 122 aa1.28□□□□□ -2.2
ATG38YLR211C RRT7Q07829 113 aa1.28□□□□□ -2.2
ATG38YLR211C ATG10Q07879 167 aa1.28□□□□□ -2.2
ATG38YLR211C CSI2Q08054 341 aa1.28□□□□□ -2.2
ATG38YLR211C RPO41P13433 1351 aaKnown RBP1.28□□□□□ -2.2
ATG38YLR211C UBR1P19812 1950 aa1.28□□□□□ -2.2
ATG38YLR211C STF2P16965 84 aa1.27□□□□□ -2.21
ATG38YLR211C RPL14AP36105 138 aaKnown RBP1.27□□□□□ -2.21
ATG38YLR211C RPL14BP38754 138 aaKnown RBP1.27□□□□□ -2.21
ATG38YLR211C MPM1P40364 252 aa1.27□□□□□ -2.21
ATG38YLR211C APS3P47064 194 aa1.27□□□□□ -2.21
ATG38YLR211C VMA10P48836 114 aaKnown RBP1.27□□□□□ -2.21
ATG38YLR211C EMC4P53073 190 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms