RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C RAD51P25454 400 aa0.74□□□□□ -2.29
CMS1YLR003C CSH1P38287 376 aa0.74□□□□□ -2.29
CMS1YLR003C YBR242WP38331 238 aa0.74□□□□□ -2.29
CMS1YLR003C EGD2P38879 174 aaKnown RBP0.74□□□□□ -2.29
CMS1YLR003C YEL028WP39989 153 aa0.74□□□□□ -2.29
CMS1YLR003C AVO2Q04749 426 aa0.74□□□□□ -2.29
CMS1YLR003C SPA2P23201 1466 aaKnown RBP0.73□□□□□ -2.29
CMS1YLR003C YIL102CP40488 101 aa0.73□□□□□ -2.29
CMS1YLR003C YML079WQ03629 201 aa0.73□□□□□ -2.29
CMS1YLR003C SYM1Q06563 197 aa0.73□□□□□ -2.29
CMS1YLR003C UIP4Q08926 304 aa0.73□□□□□ -2.29
CMS1YLR003C YPR203WQ08994 102 aa0.73□□□□□ -2.29
CMS1YLR003C YLR050CQ12155 161 aaKnown RBP0.73□□□□□ -2.29
CMS1YLR003C YER188C-AP0C0V2 99 aa0.72□□□□□ -2.29
CMS1YLR003C PRE1P22141 198 aaKnown RBP0.72□□□□□ -2.29
CMS1YLR003C MAK31P23059 88 aa0.72□□□□□ -2.29
CMS1YLR003C YRA2P36036 203 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
CMS1YLR003C YEL073CP39974 107 aa0.72□□□□□ -2.29
CMS1YLR003C YGR269WP40326 108 aa0.72□□□□□ -2.29
CMS1YLR003C XPT1P47165 209 aa0.72□□□□□ -2.29
CMS1YLR003C LIP1Q03579 150 aa0.72□□□□□ -2.29
CMS1YLR003C THI74Q04083 370 aa0.72□□□□□ -2.29
CMS1YLR003C NUF2P33895 451 aa0.71□□□□□ -2.3
CMS1YLR003C YNL200CP40165 246 aaKnown RBP0.71□□□□□ -2.3
CMS1YLR003C GEP7P53171 287 aa0.71□□□□□ -2.3
CMS1YLR003C TMA20P89886 181 aaPredicted RBP0.71□□□□□ -2.3
CMS1YLR003C YLR046CQ12253 270 aa0.71□□□□□ -2.3
CMS1YLR003C TAF2P23255 1407 aa0.71□□□□□ -2.3
CMS1YLR003C UBC6P33296 250 aaPredicted RBP0.7□□□□□ -2.3
CMS1YLR003C NQM1P53228 333 aaPredicted RBP0.7□□□□□ -2.3
CMS1YLR003C FCY1Q12178 158 aa0.7□□□□□ -2.3
CMS1YLR003C FMP49A0A023PZB3 126 aa0.69□□□□□ -2.3
CMS1YLR003C RPL35AP0CX84 120 aaKnown RBP0.69□□□□□ -2.3
CMS1YLR003C RPL35BP0CX85 120 aaKnown RBP0.69□□□□□ -2.3
CMS1YLR003C SHB17P36136 271 aaKnown RBP0.69□□□□□ -2.3
CMS1YLR003C DCV1P43595 202 aa0.69□□□□□ -2.3
CMS1YLR003C HSK3P69852 69 aa0.69□□□□□ -2.3
CMS1YLR003C GIM5Q04493 163 aa0.69□□□□□ -2.3
CMS1YLR003C LCL2Q08045 131 aa0.69□□□□□ -2.3
CMS1YLR003C VPS51P36116 164 aa0.68□□□□□ -2.3
CMS1YLR003C YKR070WP36151 352 aaKnown RBP0.68□□□□□ -2.3
CMS1YLR003C YJR015WP47090 510 aa0.68□□□□□ -2.3
CMS1YLR003C YNL140CP53910 189 aa0.68□□□□□ -2.3
CMS1YLR003C YDR476CQ03362 224 aa0.68□□□□□ -2.3
CMS1YLR003C MAK3Q03503 176 aa0.68□□□□□ -2.3
CMS1YLR003C VAM10Q08474 114 aa0.68□□□□□ -2.3
CMS1YLR003C ADE6P38972 1358 aaKnown RBP0.68□□□□□ -2.3
CMS1YLR003C SPS2P08459 502 aa0.67□□□□□ -2.3
CMS1YLR003C RPS25BP0C0T4 108 aaKnown RBP0.67□□□□□ -2.3
CMS1YLR003C UGX2P32772 223 aa0.67□□□□□ -2.3
CMS1YLR003C PAC10P48363 199 aa0.67□□□□□ -2.3
CMS1YLR003C YGL193CP53097 103 aa0.67□□□□□ -2.3
CMS1YLR003C CCW12Q12127 133 aa0.67□□□□□ -2.3
CMS1YLR003C RPS25AQ3E792 108 aaPredicted RBP0.67□□□□□ -2.3
CMS1YLR003C SRP102P36057 244 aaPredicted RBP0.66□□□□□ -2.3
CMS1YLR003C YER121WP40076 114 aa0.66□□□□□ -2.3
CMS1YLR003C CIN5P40917 295 aa0.66□□□□□ -2.3
CMS1YLR003C CCC1P47818 322 aa0.66□□□□□ -2.3
CMS1YLR003C YNR064CP53750 290 aa0.66□□□□□ -2.3
CMS1YLR003C YDL241WQ07738 123 aa0.66□□□□□ -2.3
CMS1YLR003C CMC2Q3E7A4 109 aa0.66□□□□□ -2.3
CMS1YLR003C KIN28P06242 306 aa0.65□□□□□ -2.31
CMS1YLR003C ATP5P09457 212 aa0.65□□□□□ -2.31
CMS1YLR003C YGL230CP53074 147 aa0.65□□□□□ -2.31
CMS1YLR003C YGL101WP53144 215 aa0.65□□□□□ -2.31
CMS1YLR003C YDC1Q02896 317 aa0.65□□□□□ -2.31
CMS1YLR003C KEI1Q06346 221 aa0.65□□□□□ -2.31
CMS1YLR003C QCR2P07257 368 aa0.64□□□□□ -2.31
CMS1YLR003C HTD2P38790 280 aaKnown RBP0.64□□□□□ -2.31
CMS1YLR003C YEL014CP39999 101 aa0.64□□□□□ -2.31
CMS1YLR003C LSM3P57743 89 aaKnown RBP0.64□□□□□ -2.31
CMS1YLR003C YPR114WQ06107 315 aa0.64□□□□□ -2.31
CMS1YLR003C ATG10Q07879 167 aa0.64□□□□□ -2.31
CMS1YLR003C HSL1P34244 1518 aa0.64□□□□□ -2.31
CMS1YLR003C HFA1P32874 2273 aa0.63□□□□□ -2.31
CMS1YLR003C YGL041W-AP0C5N3 154 aa0.63□□□□□ -2.31
CMS1YLR003C RPL30P14120 105 aaKnown RBP0.63□□□□□ -2.31
CMS1YLR003C SPT14P32363 452 aa0.63□□□□□ -2.31
CMS1YLR003C HSP150P32478 413 aa0.63□□□□□ -2.31
CMS1YLR003C FES1P38260 290 aa0.63□□□□□ -2.31
CMS1YLR003C APS3P47064 194 aa0.63□□□□□ -2.31
CMS1YLR003C ORM1P53224 222 aa0.63□□□□□ -2.31
CMS1YLR003C TMA23Q03525 211 aa0.63□□□□□ -2.31
CMS1YLR003C RPS28BP0C0X0 67 aaKnown RBP0.62□□□□□ -2.31
CMS1YLR003C UBI4P0CG63 381 aaKnown RBP0.62□□□□□ -2.31
CMS1YLR003C INO4P13902 151 aa0.62□□□□□ -2.31
CMS1YLR003C PEX34P25584 144 aa0.62□□□□□ -2.31
CMS1YLR003C ECM31P38122 312 aa0.62□□□□□ -2.31
CMS1YLR003C YPT31P38555 223 aaKnown RBP0.62□□□□□ -2.31
CMS1YLR003C YLR053CQ12026 108 aa0.62□□□□□ -2.31
CMS1YLR003C RDI1Q12434 202 aa0.62□□□□□ -2.31
CMS1YLR003C CMC4Q3E7A9 73 aa0.62□□□□□ -2.31
CMS1YLR003C RPS28AQ3E7X9 67 aaPredicted RBP0.62□□□□□ -2.31
CMS1YLR003C YCR001WP25347 104 aa0.61□□□□□ -2.31
CMS1YLR003C YNL122CP53921 115 aaPredicted RBP0.61□□□□□ -2.31
CMS1YLR003C YPR202WQ08993 238 aa0.61□□□□□ -2.31
CMS1YLR003C UBR1P19812 1950 aa0.61□□□□□ -2.31
CMS1YLR003C YOL013W-AP0C272 63 aaPredicted RBP0.6□□□□□ -2.31
CMS1YLR003C BUB2P26448 306 aaPredicted RBP0.6□□□□□ -2.31
CMS1YLR003C YBR027CP38220 110 aa0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms