RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W AIF1P52923 378 aa1.81□□□□□ -2.12
SNU114YKL173W YOL160WQ08321 113 aa1.81□□□□□ -2.12
SNU114YKL173W YLR118CQ12354 227 aa1.81□□□□□ -2.12
SNU114YKL173W FMP49A0A023PZB3 126 aa1.81□□□□□ -2.12
SNU114YKL173W SIR2P06700 562 aa1.81□□□□□ -2.12
SNU114YKL173W SNF4P12904 322 aa1.81□□□□□ -2.12
SNU114YKL173W MAG1P22134 296 aaKnown RBP1.81□□□□□ -2.12
SNU114YKL173W PEX34P25584 144 aa1.81□□□□□ -2.12
SNU114YKL173W SNC2P33328 115 aa1.81□□□□□ -2.12
SNU114YKL173W RPL14AP36105 138 aaKnown RBP1.81□□□□□ -2.12
SNU114YKL173W RPL14BP38754 138 aaKnown RBP1.81□□□□□ -2.12
SNU114YKL173W RRT13P40042 185 aa1.81□□□□□ -2.12
SNU114YKL173W YDR366CP87287 132 aa1.81□□□□□ -2.12
SNU114YKL173W OCA6Q12454 224 aa1.81□□□□□ -2.12
SNU114YKL173W HKR1P41809 1802 aa1.81□□□□□ -2.12
SNU114YKL173W SEN1Q00416 2231 aaKnown RBP1.8□□□□□ -2.12
SNU114YKL173W HAP2P06774 265 aa1.8□□□□□ -2.12
SNU114YKL173W PRE1P22141 198 aaKnown RBP1.8□□□□□ -2.12
SNU114YKL173W RCN1P36054 211 aa1.8□□□□□ -2.12
SNU114YKL173W SHB17P36136 271 aaKnown RBP1.8□□□□□ -2.12
SNU114YKL173W ETR1P38071 380 aa1.8□□□□□ -2.12
SNU114YKL173W BUD13P46947 266 aaPredicted RBP1.8□□□□□ -2.12
SNU114YKL173W OST2P46964 130 aa1.8□□□□□ -2.12
SNU114YKL173W AIM36Q03798 255 aa1.8□□□□□ -2.12
SNU114YKL173W COA4Q05809 96 aa1.8□□□□□ -2.12
SNU114YKL173W PIN3Q06449 215 aa1.8□□□□□ -2.12
SNU114YKL173W RPL30P14120 105 aaKnown RBP1.8□□□□□ -2.12
SNU114YKL173W SKG1P36169 355 aa1.8□□□□□ -2.12
SNU114YKL173W EDC2P40023 145 aaPredicted RBP1.8□□□□□ -2.12
SNU114YKL173W YFR054CP43622 192 aa1.8□□□□□ -2.12
SNU114YKL173W SFT1P43682 97 aa1.8□□□□□ -2.12
SNU114YKL173W FIP1P45976 327 aa1.8□□□□□ -2.12
SNU114YKL173W TTI2P47168 421 aa1.8□□□□□ -2.12
SNU114YKL173W YGL088WP53151 121 aa1.8□□□□□ -2.12
SNU114YKL173W TVP18Q04767 167 aa1.8□□□□□ -2.12
SNU114YKL173W RNH202Q05635 350 aa1.8□□□□□ -2.12
SNU114YKL173W GEP5Q12393 293 aa1.8□□□□□ -2.12
SNU114YKL173W YPL247CQ12523 523 aa1.8□□□□□ -2.12
SNU114YKL173W ANB1P19211 157 aa1.8□□□□□ -2.12
SNU114YKL173W CCA1P21269 546 aa1.8□□□□□ -2.12
SNU114YKL173W SEC17P32602 292 aa1.8□□□□□ -2.12
SNU114YKL173W IRC22P40006 225 aa1.8□□□□□ -2.12
SNU114YKL173W AVT6P40074 448 aa1.8□□□□□ -2.12
SNU114YKL173W YER181CP40097 107 aa1.8□□□□□ -2.12
SNU114YKL173W ERV29P53337 310 aa1.8□□□□□ -2.12
SNU114YKL173W GOT1Q03554 138 aa1.8□□□□□ -2.12
SNU114YKL173W YPS3Q12303 508 aa1.8□□□□□ -2.12
SNU114YKL173W DGK1Q12382 290 aa1.8□□□□□ -2.12
SNU114YKL173W GTT2Q12390 233 aa1.8□□□□□ -2.12
SNU114YKL173W CCH1P50077 2039 aa1.79□□□□□ -2.12
SNU114YKL173W IRA1P18963 3092 aa1.79□□□□□ -2.12
SNU114YKL173W ERG2P32352 222 aa1.79□□□□□ -2.12
SNU114YKL173W SKI6P46948 246 aaPredicted RBP1.79□□□□□ -2.12
SNU114YKL173W YJL028WP47062 111 aa1.79□□□□□ -2.12
SNU114YKL173W MDM34P53083 459 aa1.79□□□□□ -2.12
SNU114YKL173W APJ1P53940 528 aa1.79□□□□□ -2.12
SNU114YKL173W MRPS16Q02608 121 aa1.79□□□□□ -2.12
SNU114YKL173W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SNU114YKL173W ATO3Q12359 275 aa1.79□□□□□ -2.12
SNU114YKL173W YCR075W-AQ3E830 75 aa1.79□□□□□ -2.12
SNU114YKL173W MBF1O14467 151 aaKnown RBP1.79□□□□□ -2.12
SNU114YKL173W RPE1P46969 238 aa1.79□□□□□ -2.12
SNU114YKL173W SWT21P53873 357 aaPredicted RBP1.79□□□□□ -2.12
SNU114YKL173W YMR099CQ03161 297 aaKnown RBP1.79□□□□□ -2.12
SNU114YKL173W TMC1Q08422 150 aaPredicted RBP1.79□□□□□ -2.12
SNU114YKL173W YBL008W-AQ3E821 79 aa1.79□□□□□ -2.12
SNU114YKL173W FLO11P08640 1367 aa1.79□□□□□ -2.12
SNU114YKL173W FAB1P34756 2278 aa1.79□□□□□ -2.12
SNU114YKL173W YLR462WO13556 202 aa1.78□□□□□ -2.12
SNU114YKL173W Q0255P03881 472 aa1.78□□□□□ -2.12
SNU114YKL173W ECM31P38122 312 aa1.78□□□□□ -2.12
SNU114YKL173W YHR140WP38842 239 aa1.78□□□□□ -2.12
SNU114YKL173W RPB11P38902 120 aa1.78□□□□□ -2.12
SNU114YKL173W ASP1P38986 381 aaPredicted RBP1.78□□□□□ -2.12
SNU114YKL173W TDA4P47153 279 aa1.78□□□□□ -2.12
SNU114YKL173W YNL033WP53964 284 aa1.78□□□□□ -2.12
SNU114YKL173W YNL019CP53975 284 aa1.78□□□□□ -2.12
SNU114YKL173W YPR114WQ06107 315 aa1.78□□□□□ -2.12
SNU114YKL173W NAT3Q06504 195 aa1.78□□□□□ -2.12
SNU114YKL173W SPT14P32363 452 aa1.78□□□□□ -2.12
SNU114YKL173W YOR062CP36025 268 aa1.78□□□□□ -2.12
SNU114YKL173W MSA2P36157 363 aa1.78□□□□□ -2.12
SNU114YKL173W SPL2P38839 148 aa1.78□□□□□ -2.12
SNU114YKL173W AST2P39945 430 aaKnown RBP1.78□□□□□ -2.12
SNU114YKL173W CAT5P41735 233 aa1.78□□□□□ -2.12
SNU114YKL173W GON7P46984 123 aa1.78□□□□□ -2.12
SNU114YKL173W YGL118CP53132 145 aa1.78□□□□□ -2.12
SNU114YKL173W AIM11P87275 137 aa1.78□□□□□ -2.12
SNU114YKL173W RSM10Q03201 203 aa1.78□□□□□ -2.12
SNU114YKL173W GRH1Q04410 372 aaKnown RBP1.78□□□□□ -2.12
SNU114YKL173W YDL211CQ12121 372 aa1.78□□□□□ -2.12
SNU114YKL173W YNL277W-AQ3E7Z0 62 aa1.78□□□□□ -2.12
SNU114YKL173W YHR214C-EQ8TGK0 99 aa1.78□□□□□ -2.12
SNU114YKL173W SAS5Q99314 248 aa1.78□□□□□ -2.12
SNU114YKL173W SOD1P00445 154 aaKnown RBP1.77□□□□□ -2.13
SNU114YKL173W MRPL39P36533 70 aa1.77□□□□□ -2.13
SNU114YKL173W GPI18P38211 433 aa1.77□□□□□ -2.13
SNU114YKL173W ERV15P38312 142 aa1.77□□□□□ -2.13
SNU114YKL173W PHO89P38361 574 aa1.77□□□□□ -2.13
SNU114YKL173W YEA6P39953 335 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms