RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W UTR5P32630 166 aa5.4□□□□□ -1.54
PDA1YER178W YBR144CP34215 104 aa5.4□□□□□ -1.54
PDA1YER178W MST28P39552 234 aa5.4□□□□□ -1.54
PDA1YER178W MIC27P50945 234 aa5.4□□□□□ -1.54
PDA1YER178W MST27P53176 234 aa5.4□□□□□ -1.54
PDA1YER178W MRPL50P53724 139 aa5.4□□□□□ -1.54
PDA1YER178W ADD37Q03233 198 aa5.4□□□□□ -1.54
PDA1YER178W FCF2Q12035 217 aaPredicted RBP5.4□□□□□ -1.54
PDA1YER178W TDH1P00360 332 aaKnown RBP5.39□□□□□ -1.55
PDA1YER178W DER1P38307 211 aa5.39□□□□□ -1.55
PDA1YER178W RTC3P38804 111 aaPredicted RBP5.39□□□□□ -1.55
PDA1YER178W PET100P38958 111 aa5.39□□□□□ -1.55
PDA1YER178W MRPL49P40858 161 aaPredicted RBP5.39□□□□□ -1.55
PDA1YER178W CAF16P43569 289 aa5.39□□□□□ -1.55
PDA1YER178W FMP16Q12497 93 aa5.39□□□□□ -1.55
PDA1YER178W ALK2P32789 676 aaPredicted RBP5.38□□□□□ -1.55
PDA1YER178W PTC7P38797 343 aa5.38□□□□□ -1.55
PDA1YER178W PEX7P39108 375 aa5.38□□□□□ -1.55
PDA1YER178W SIM1P40472 476 aa5.38□□□□□ -1.55
PDA1YER178W POR2P40478 281 aa5.38□□□□□ -1.55
PDA1YER178W RTS2P40962 232 aa5.38□□□□□ -1.55
PDA1YER178W YPI1P43587 155 aa5.38□□□□□ -1.55
PDA1YER178W AIM24P47127 394 aa5.38□□□□□ -1.55
PDA1YER178W OCA2P53949 197 aa5.38□□□□□ -1.55
PDA1YER178W MRPS17Q03246 237 aaPredicted RBP5.38□□□□□ -1.55
PDA1YER178W GRH1Q04410 372 aaKnown RBP5.38□□□□□ -1.55
PDA1YER178W YLR179CQ06252 201 aaKnown RBP5.38□□□□□ -1.55
PDA1YER178W ATP14Q12349 124 aa5.38□□□□□ -1.55
PDA1YER178W AUA1P32450 94 aa5.37□□□□□ -1.55
PDA1YER178W SFT2P38166 215 aa5.37□□□□□ -1.55
PDA1YER178W HUA1P40325 198 aa5.37□□□□□ -1.55
PDA1YER178W DSK2P48510 373 aa5.37□□□□□ -1.55
PDA1YER178W PHO23P50947 330 aa5.37□□□□□ -1.55
PDA1YER178W ODC1Q03028 310 aa5.37□□□□□ -1.55
PDA1YER178W COX19Q3E731 98 aa5.37□□□□□ -1.55
PDA1YER178W DFR1P07807 211 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
PDA1YER178W YNR066CP53752 436 aa5.36□□□□□ -1.55
PDA1YER178W SDO1Q07953 250 aaKnown RBP5.36□□□□□ -1.55
PDA1YER178W YLR122CQ12312 125 aa5.36□□□□□ -1.55
PDA1YER178W QCR9P22289 66 aa5.35□□□□□ -1.55
PDA1YER178W RPS0AP32905 252 aaKnown RBP5.35□□□□□ -1.55
PDA1YER178W ECM33P38248 429 aaKnown RBP5.35□□□□□ -1.55
PDA1YER178W TRS20P38334 175 aa5.35□□□□□ -1.55
PDA1YER178W EMC5P40540 141 aa5.35□□□□□ -1.55
PDA1YER178W SRB7P47822 140 aa5.35□□□□□ -1.55
PDA1YER178W LDS2Q08218 356 aa5.35□□□□□ -1.55
PDA1YER178W YOL160WQ08321 113 aa5.35□□□□□ -1.55
PDA1YER178W RPL14AP36105 138 aaKnown RBP5.34□□□□□ -1.55
PDA1YER178W RPL14BP38754 138 aaKnown RBP5.34□□□□□ -1.55
PDA1YER178W MPC2P38857 129 aa5.34□□□□□ -1.55
PDA1YER178W HAM1P47119 197 aaKnown RBP5.34□□□□□ -1.55
PDA1YER178W TDA4P47153 279 aa5.34□□□□□ -1.55
PDA1YER178W MIC26P50087 233 aa5.34□□□□□ -1.55
PDA1YER178W YDR274CP87283 123 aa5.34□□□□□ -1.55
PDA1YER178W FIT2Q08906 153 aa5.34□□□□□ -1.55
PDA1YER178W TY1A-DR3Q12441 440 aa5.34□□□□□ -1.55
PDA1YER178W PRM7Q12459 698 aa5.34□□□□□ -1.55
PDA1YER178W YOR011W-AQ3E807 68 aa5.34□□□□□ -1.55
PDA1YER178W RPS2P25443 254 aaKnown RBP5.33□□□□□ -1.56
PDA1YER178W NRG2P38082 220 aa5.33□□□□□ -1.56
PDA1YER178W SAS2P40963 338 aa5.33□□□□□ -1.56
PDA1YER178W LOC1P43586 204 aaPredicted RBP5.33□□□□□ -1.56
PDA1YER178W RIB4P50861 169 aaPredicted RBP5.33□□□□□ -1.56
PDA1YER178W ORM1P53224 222 aa5.33□□□□□ -1.56
PDA1YER178W FMP41P53889 259 aaKnown RBP5.33□□□□□ -1.56
PDA1YER178W YCL001W-AP87012 153 aa5.33□□□□□ -1.56
PDA1YER178W SDH7Q04401 133 aa5.33□□□□□ -1.56
PDA1YER178W PRE9P23638 258 aaKnown RBP5.32□□□□□ -1.56
PDA1YER178W SNF11P38956 169 aa5.32□□□□□ -1.56
PDA1YER178W VMA7P39111 118 aa5.32□□□□□ -1.56
PDA1YER178W SPC25P40014 221 aa5.32□□□□□ -1.56
PDA1YER178W YIL077CP40508 320 aa5.32□□□□□ -1.56
PDA1YER178W YNR071CP53757 342 aa5.32□□□□□ -1.56
PDA1YER178W ERV25P54837 211 aaKnown RBP5.32□□□□□ -1.56
PDA1YER178W MSC3Q05812 728 aa5.32□□□□□ -1.56
PDA1YER178W YBR085C-AO43137 85 aa5.31□□□□□ -1.56
PDA1YER178W ERS1P17261 260 aa5.31□□□□□ -1.56
PDA1YER178W TIR2P33890 251 aa5.31□□□□□ -1.56
PDA1YER178W CMC1P36064 111 aa5.31□□□□□ -1.56
PDA1YER178W YBR292CP38357 123 aa5.31□□□□□ -1.56
PDA1YER178W YFR035CP43608 114 aa5.31□□□□□ -1.56
PDA1YER178W GPI2P46961 280 aa5.31□□□□□ -1.56
PDA1YER178W COX18P53239 316 aa5.31□□□□□ -1.56
PDA1YER178W TOM7P53507 60 aa5.31□□□□□ -1.56
PDA1YER178W TMA23Q03525 211 aa5.31□□□□□ -1.56
PDA1YER178W RAV2Q03956 351 aa5.31□□□□□ -1.56
PDA1YER178W ERV2Q12284 196 aa5.31□□□□□ -1.56
PDA1YER178W DDI2P0CH63 225 aa5.3□□□□□ -1.56
PDA1YER178W DDI3P0CH64 225 aa5.3□□□□□ -1.56
PDA1YER178W YRA2P36036 203 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
PDA1YER178W SNX4P47057 423 aa5.3□□□□□ -1.56
PDA1YER178W SNN1P48232 102 aa5.3□□□□□ -1.56
PDA1YER178W UBC12P52491 188 aa5.3□□□□□ -1.56
PDA1YER178W CAF40P53829 373 aa5.3□□□□□ -1.56
PDA1YER178W IZH1Q03419 316 aa5.3□□□□□ -1.56
PDA1YER178W YMR244WQ04018 355 aa5.3□□□□□ -1.56
PDA1YER178W VMA9Q3E7B6 73 aa5.3□□□□□ -1.56
PDA1YER178W Q0142Q9ZZW4 58 aa5.3□□□□□ -1.56
PDA1YER178W SDH4P37298 181 aa5.29□□□□□ -1.56
PDA1YER178W YBR090CP38253 122 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms