RNA–Protein interactions for RNA: YER050C

RSM18, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM18, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM18	YER050C	YEL073C	P39974	107 aa		0.92	□□□□□ -2.26
RSM18	YER050C	GLR1	P41921	483 aa	Known RBP	0.92	□□□□□ -2.26
RSM18	YER050C	YFL051C	P43552	160 aa		0.92	□□□□□ -2.26
RSM18	YER050C	TIM13	P53299	105 aa		0.92	□□□□□ -2.26
RSM18	YER050C	YMR030W-A	Q3E760	96 aa		0.92	□□□□□ -2.26
RSM18	YER050C	SAC3	P46674	1301 aa		0.91	□□□□□ -2.26
RSM18	YER050C	AHT1	P29589	182 aa		0.91	□□□□□ -2.26
RSM18	YER050C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
RSM18	YER050C	PAC10	P48363	199 aa		0.91	□□□□□ -2.26
RSM18	YER050C	FIT1	Q04433	528 aa		0.91	□□□□□ -2.26
RSM18	YER050C	SYM1	Q06563	197 aa		0.91	□□□□□ -2.26
RSM18	YER050C	YDL241W	Q07738	123 aa		0.91	□□□□□ -2.26
RSM18	YER050C	LCL2	Q08045	131 aa		0.91	□□□□□ -2.26
RSM18	YER050C	CMD1	P06787	147 aa	Known RBP	0.9	□□□□□ -2.27
RSM18	YER050C	XPT1	P47165	209 aa		0.9	□□□□□ -2.27
RSM18	YER050C	SBH2	P52871	88 aa		0.9	□□□□□ -2.27
RSM18	YER050C	ORM1	P53224	222 aa		0.9	□□□□□ -2.27
RSM18	YER050C	TRM3	Q07527	1436 aa		0.89	□□□□□ -2.27
RSM18	YER050C	HFA1	P32874	2273 aa		0.89	□□□□□ -2.27
RSM18	YER050C	PTC1	P35182	281 aa		0.89	□□□□□ -2.27
RSM18	YER050C	YGL101W	P53144	215 aa		0.89	□□□□□ -2.27
RSM18	YER050C	NUF2	P33895	451 aa		0.88	□□□□□ -2.27
RSM18	YER050C	SHB17	P36136	271 aa	Known RBP	0.88	□□□□□ -2.27
RSM18	YER050C	YGR269W	P40326	108 aa		0.88	□□□□□ -2.27
RSM18	YER050C	MOB1	P40484	314 aa		0.88	□□□□□ -2.27
RSM18	YER050C	NQM1	P53228	333 aa	Predicted RBP	0.88	□□□□□ -2.27
RSM18	YER050C	PLP1	Q04004	230 aa		0.88	□□□□□ -2.27
RSM18	YER050C	RDI1	Q12434	202 aa		0.88	□□□□□ -2.27
RSM18	YER050C	UBI4	P0CG63	381 aa	Known RBP	0.87	□□□□□ -2.27
RSM18	YER050C	CCC1	P47818	322 aa		0.87	□□□□□ -2.27
RSM18	YER050C	HHT1	P61830	136 aa		0.87	□□□□□ -2.27
RSM18	YER050C	LIP1	Q03579	150 aa		0.87	□□□□□ -2.27
RSM18	YER050C	CMC4	Q3E7A9	73 aa		0.87	□□□□□ -2.27
RSM18	YER050C	INO4	P13902	151 aa		0.86	□□□□□ -2.27
RSM18	YER050C	GRX5	Q02784	150 aa		0.86	□□□□□ -2.27
RSM18	YER050C	TLG1	Q03322	224 aa		0.86	□□□□□ -2.27
RSM18	YER050C	YPR114W	Q06107	315 aa		0.86	□□□□□ -2.27
RSM18	YER050C	YPR202W	Q08993	238 aa		0.86	□□□□□ -2.27
RSM18	YER050C	YDL157C	Q12082	118 aa		0.86	□□□□□ -2.27
RSM18	YER050C	CMC2	Q3E7A4	109 aa		0.86	□□□□□ -2.27
RSM18	YER050C	SPS2	P08459	502 aa		0.85	□□□□□ -2.27
RSM18	YER050C	ATP5	P09457	212 aa		0.85	□□□□□ -2.27
RSM18	YER050C	VPS51	P36116	164 aa		0.85	□□□□□ -2.27
RSM18	YER050C	SLM6	P38343	150 aa		0.85	□□□□□ -2.27
RSM18	YER050C	YPT31	P38555	223 aa	Known RBP	0.85	□□□□□ -2.27
RSM18	YER050C	YML079W	Q03629	201 aa		0.85	□□□□□ -2.27
RSM18	YER050C	YDR102C	Q03864	110 aa		0.85	□□□□□ -2.27
RSM18	YER050C	HRD1	Q08109	551 aa		0.85	□□□□□ -2.27
RSM18	YER050C	CCW12	Q12127	133 aa		0.85	□□□□□ -2.27
RSM18	YER050C	YLR046C	Q12253	270 aa		0.85	□□□□□ -2.27
RSM18	YER050C	RIF1	P29539	1916 aa		0.85	□□□□□ -2.27
RSM18	YER050C	MRS4	P23500	304 aa		0.84	□□□□□ -2.27
RSM18	YER050C	YKR070W	P36151	352 aa	Known RBP	0.84	□□□□□ -2.27
RSM18	YER050C	YGL230C	P53074	147 aa		0.84	□□□□□ -2.27
RSM18	YER050C	LSM3	P57743	89 aa	Known RBP	0.84	□□□□□ -2.27
RSM18	YER050C	TMA20	P89886	181 aa	Predicted RBP	0.84	□□□□□ -2.27
RSM18	YER050C	ATG10	Q07879	167 aa		0.84	□□□□□ -2.27
RSM18	YER050C	YLR053C	Q12026	108 aa		0.84	□□□□□ -2.27
RSM18	YER050C	RPS25B	P0C0T4	108 aa	Known RBP	0.83	□□□□□ -2.28
RSM18	YER050C	FES1	P38260	290 aa		0.83	□□□□□ -2.28
RSM18	YER050C	HTD2	P38790	280 aa	Known RBP	0.83	□□□□□ -2.28
RSM18	YER050C	DCV1	P43595	202 aa		0.83	□□□□□ -2.28
RSM18	YER050C	FIP1	P45976	327 aa		0.83	□□□□□ -2.28
RSM18	YER050C	YNR064C	P53750	290 aa		0.83	□□□□□ -2.28
RSM18	YER050C	UIP4	Q08926	304 aa		0.83	□□□□□ -2.28
RSM18	YER050C	RPS25A	Q3E792	108 aa	Predicted RBP	0.83	□□□□□ -2.28
RSM18	YER050C	RPL30	P14120	105 aa	Known RBP	0.82	□□□□□ -2.28
RSM18	YER050C	SPT14	P32363	452 aa		0.82	□□□□□ -2.28
RSM18	YER050C	HSP150	P32478	413 aa		0.82	□□□□□ -2.28
RSM18	YER050C	UGX2	P32772	223 aa		0.82	□□□□□ -2.28
RSM18	YER050C	AME1	P38313	324 aa		0.82	□□□□□ -2.28
RSM18	YER050C	YAR064W	P39563	99 aa		0.82	□□□□□ -2.28
RSM18	YER050C	FCY1	Q12178	158 aa		0.82	□□□□□ -2.28
RSM18	YER050C	CDC39	P25655	2108 aa	Known RBP	0.82	□□□□□ -2.28
RSM18	YER050C	QCR2	P07257	368 aa		0.81	□□□□□ -2.28
RSM18	YER050C	TAF2	P23255	1407 aa		0.81	□□□□□ -2.28
RSM18	YER050C	KIN28	P06242	306 aa		0.8	□□□□□ -2.28
RSM18	YER050C	YEL014C	P39999	101 aa		0.8	□□□□□ -2.28
RSM18	YER050C	GLC8	P41818	229 aa		0.8	□□□□□ -2.28
RSM18	YER050C	YGL193C	P53097	103 aa		0.8	□□□□□ -2.28
RSM18	YER050C	KEI1	Q06346	221 aa		0.8	□□□□□ -2.28
RSM18	YER050C	RPS28B	P0C0X0	67 aa	Known RBP	0.79	□□□□□ -2.28
RSM18	YER050C	SRP102	P36057	244 aa	Predicted RBP	0.79	□□□□□ -2.28
RSM18	YER050C	DER1	P38307	211 aa		0.79	□□□□□ -2.28
RSM18	YER050C	DLS1	P40366	167 aa		0.79	□□□□□ -2.28
RSM18	YER050C	APQ12	P40532	138 aa		0.79	□□□□□ -2.28
RSM18	YER050C	YJL218W	P40892	196 aa	Known RBP	0.79	□□□□□ -2.28
RSM18	YER050C	YJR015W	P47090	510 aa		0.79	□□□□□ -2.28
RSM18	YER050C	YDC1	Q02896	317 aa		0.79	□□□□□ -2.28
RSM18	YER050C	SMD2	Q06217	110 aa	Known RBP	0.79	□□□□□ -2.28
RSM18	YER050C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.79	□□□□□ -2.28
RSM18	YER050C	ADE6	P38972	1358 aa	Known RBP	0.79	□□□□□ -2.28
RSM18	YER050C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.78	□□□□□ -2.28
RSM18	YER050C	PRE1	P22141	198 aa	Known RBP	0.78	□□□□□ -2.28
RSM18	YER050C	YBR027C	P38220	110 aa		0.78	□□□□□ -2.28
RSM18	YER050C	CIN5	P40917	295 aa		0.78	□□□□□ -2.28
RSM18	YER050C	GEP7	P53171	287 aa		0.78	□□□□□ -2.28
RSM18	YER050C	MAK3	Q03503	176 aa		0.78	□□□□□ -2.28
RSM18	YER050C	NSL1	Q12143	216 aa		0.78	□□□□□ -2.28
RSM18	YER050C	YCR001W	P25347	104 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms