RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	ADD37	Q03233	198 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	MHR1	Q06630	226 aa		5.18	□□□□□ -1.58
VMA3	YEL027W	QCR9	P22289	66 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	AHT1	P29589	182 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	SCM4	P32564	187 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	SHB17	P36136	271 aa	Known RBP	5.17	□□□□□ -1.58
VMA3	YEL027W	PRS4	P38063	326 aa	Predicted RBP	5.17	□□□□□ -1.58
VMA3	YEL027W	YBL071C	P38185	102 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	QDR3	P38227	689 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	GPP2	P40106	250 aa	Known RBP	5.17	□□□□□ -1.58
VMA3	YEL027W	VMA21	P41806	77 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	YJR015W	P47090	510 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	OCA2	P53949	197 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	TMA23	Q03525	211 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	POS5	Q06892	414 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	POM34	Q12445	299 aa		5.17	□□□□□ -1.58
VMA3	YEL027W	SPO13	P23624	291 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	POF1	P25576	258 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	CDC50	P25656	391 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	SSS1	P35179	80 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	MRPL38	P35996	138 aa	Predicted RBP	5.16	□□□□□ -1.58
VMA3	YEL027W	YKL075C	P36083	450 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	SDH4	P37298	181 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	YBR013C	P38215	129 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	CSH1	P38287	376 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	RTS2	P40962	232 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	WWM1	P43582	211 aa	Known RBP	5.16	□□□□□ -1.58
VMA3	YEL027W	MIC27	P50945	234 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	SPG4	Q04438	115 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	ARR3	Q06598	404 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	YOR015W	Q12169	119 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	PAA1	Q12447	191 aa	Known RBP	5.16	□□□□□ -1.58
VMA3	YEL027W	COX19	Q3E731	98 aa		5.16	□□□□□ -1.58
VMA3	YEL027W	PIS1	P06197	220 aa	Known RBP	5.15	□□□□□ -1.59
VMA3	YEL027W	CDC7	P06243	507 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	ELO2	P25358	347 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	INO2	P26798	304 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	YBL059W	P34224	193 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	DOG2	P38773	246 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	DOG1	P38774	246 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	SMD3	P43321	101 aa	Known RBP	5.15	□□□□□ -1.59
VMA3	YEL027W	RIB4	P50861	169 aa	Predicted RBP	5.15	□□□□□ -1.59
VMA3	YEL027W	YHP1	Q04116	353 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	SHH3	Q04487	196 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	YMR253C	Q04835	414 aa		5.15	□□□□□ -1.59
VMA3	YEL027W	MRPL44	P19956	98 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	RRT1	P38192	103 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	FLO5	P38894	1075 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	YAR068W	P39564	161 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	BDH1	P39714	382 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	AGE2	P40529	298 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	SAS2	P40963	338 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	TIM21	P53220	239 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	LST7	P53237	242 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	AVO2	Q04749	426 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	CTR3	Q06686	241 aa		5.14	□□□□□ -1.59
VMA3	YEL027W	PBP4	Q07362	185 aa	Known RBP	5.14	□□□□□ -1.59
VMA3	YEL027W	YMR316C-A	I2HB70	103 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	ADH3	P07246	375 aa	Known RBP	5.13	□□□□□ -1.59
VMA3	YEL027W	YCR022C	P25620	114 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	YPS1	P32329	569 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	ALK2	P32789	676 aa	Predicted RBP	5.13	□□□□□ -1.59
VMA3	YEL027W	NTF2	P33331	125 aa	Known RBP	5.13	□□□□□ -1.59
VMA3	YEL027W	RIB5	P38145	238 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	DER1	P38307	211 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	PTC7	P38797	343 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	GET2	P40056	285 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	YGR018C	P53211	109 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	SWT21	P53873	357 aa	Predicted RBP	5.13	□□□□□ -1.59
VMA3	YEL027W	YMR007W	Q03675	126 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	SDH7	Q04401	133 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	SEN15	Q04675	128 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	RXT3	Q07458	294 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	YOR352W	Q08816	343 aa		5.13	□□□□□ -1.59
VMA3	YEL027W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
VMA3	YEL027W	SEC59	P20048	519 aa		5.12	□□□□□ -1.59
VMA3	YEL027W	RPL14A	P36105	138 aa	Known RBP	5.12	□□□□□ -1.59
VMA3	YEL027W	MRPL28	P36527	147 aa		5.12	□□□□□ -1.59
VMA3	YEL027W	RPL14B	P38754	138 aa	Known RBP	5.12	□□□□□ -1.59
VMA3	YEL027W	VPS55	P47111	140 aa		5.12	□□□□□ -1.59
VMA3	YEL027W	YGR219W	P53307	113 aa		5.12	□□□□□ -1.59
VMA3	YEL027W	PAU4	P53427	120 aa		5.12	□□□□□ -1.59
VMA3	YEL027W	YML122C	Q03207	126 aa		5.12	□□□□□ -1.59
VMA3	YEL027W	ATC1	Q04005	294 aa		5.12	□□□□□ -1.59
VMA3	YEL027W	IRC23	Q08416	157 aa		5.12	□□□□□ -1.59
VMA3	YEL027W	SME1	Q12330	94 aa	Predicted RBP	5.12	□□□□□ -1.59
VMA3	YEL027W	YGL185C	P53100	379 aa		5.11	□□□□□ -1.59
VMA3	YEL027W	CPD1	P53314	239 aa		5.11	□□□□□ -1.59
VMA3	YEL027W	CAB4	P53332	305 aa		5.11	□□□□□ -1.59
VMA3	YEL027W	HOR7	Q05827	59 aa		5.11	□□□□□ -1.59
VMA3	YEL027W	MED7	Q08278	222 aa		5.11	□□□□□ -1.59
VMA3	YEL027W	PAU1	P0CE88	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	PAU14	P0CE89	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	PAU6	P0CE90	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	PAU18	P0CE91	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	PAU8	P0CE92	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	PAU11	P0CE93	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	MRPL4	P36517	319 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	MIC12	P38341	106 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	PAU13	P38725	120 aa		5.1	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 120.9 ms