RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	CLB6	P32943	380 aa		3.74	□□□□□ -1.81
SNF11	YDR073W	YJL144W	P47009	104 aa		3.74	□□□□□ -1.81
SNF11	YDR073W	ERG25	P53045	309 aa		3.74	□□□□□ -1.81
SNF11	YDR073W	EST3	Q03096	181 aa		3.74	□□□□□ -1.81
SNF11	YDR073W	YDR102C	Q03864	110 aa		3.74	□□□□□ -1.81
SNF11	YDR073W	NKP2	Q06162	153 aa		3.74	□□□□□ -1.81
SNF11	YDR073W	FRQ1	Q06389	190 aa		3.74	□□□□□ -1.81
SNF11	YDR073W	WIP1	Q2V2P8	89 aa		3.74	□□□□□ -1.81
SNF11	YDR073W	SPA2	P23201	1466 aa	Known RBP	3.73	□□□□□ -1.81
SNF11	YDR073W	PHO85	P17157	305 aa		3.73	□□□□□ -1.81
SNF11	YDR073W	AHT1	P29589	182 aa		3.73	□□□□□ -1.81
SNF11	YDR073W	YOR062C	P36025	268 aa		3.73	□□□□□ -1.81
SNF11	YDR073W	SVP26	P38869	228 aa		3.73	□□□□□ -1.81
SNF11	YDR073W	DAD3	P69850	94 aa		3.73	□□□□□ -1.81
SNF11	YDR073W	PIR1	Q03178	341 aa		3.73	□□□□□ -1.81
SNF11	YDR073W	RAD28	Q12021	506 aa		3.73	□□□□□ -1.81
SNF11	YDR073W	PRM7	Q12459	698 aa		3.73	□□□□□ -1.81
SNF11	YDR073W	GPA2	P10823	449 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	SHB17	P36136	271 aa	Known RBP	3.72	□□□□□ -1.81
SNF11	YDR073W	YHR140W	P38842	239 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	SPO73	P40031	143 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	SAY1	P53324	424 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	YNL019C	P53975	284 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	RIM9	Q04734	239 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	RRT7	Q07829	113 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	YNL277W-A	Q3E7Z0	62 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	YOR381W-A	Q3E804	55 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	Q0144	Q9ZZW2	109 aa		3.72	□□□□□ -1.81
SNF11	YDR073W	FMP49	A0A023PZB3	126 aa		3.71	□□□□□ -1.82
SNF11	YDR073W	HSP12	P22943	109 aa	Known RBP	3.71	□□□□□ -1.82
SNF11	YDR073W	PRP11	Q07350	266 aa	Predicted RBP	3.71	□□□□□ -1.82
SNF11	YDR073W	UIP4	Q08926	304 aa		3.71	□□□□□ -1.82
SNF11	YDR073W	YPR013C	Q12145	317 aa		3.71	□□□□□ -1.82
SNF11	YDR073W	MRP49	P32388	137 aa		3.7	□□□□□ -1.82
SNF11	YDR073W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.7	□□□□□ -1.82	not detected
SNF11	YDR073W	YHR022C	P38763	256 aa		3.7	□□□□□ -1.82
SNF11	YDR073W	CYT2	Q00873	224 aa		3.7	□□□□□ -1.82
SNF11	YDR073W	YPR174C	Q06616	221 aa	Predicted RBP	3.7	□□□□□ -1.82
SNF11	YDR073W	YOR015W	Q12169	119 aa		3.7	□□□□□ -1.82
SNF11	YDR073W	YDL012C	Q12489	107 aa		3.7	□□□□□ -1.82
SNF11	YDR073W	BOL1	Q3E793	110 aa		3.7	□□□□□ -1.82
SNF11	YDR073W	TFC1	P32367	649 aa		3.69	□□□□□ -1.82
SNF11	YDR073W	RPS1A	P33442	255 aa	Known RBP	3.69	□□□□□ -1.82
SNF11	YDR073W	GAA1	P39012	614 aa		3.69	□□□□□ -1.82
SNF11	YDR073W	VMA7	P39111	118 aa		3.69	□□□□□ -1.82
SNF11	YDR073W	YGR017W	P53210	297 aa		3.69	□□□□□ -1.82
SNF11	YDR073W	BUD25	P85052	153 aa		3.69	□□□□□ -1.82
SNF11	YDR073W	UPS3	Q04006	179 aa		3.69	□□□□□ -1.82
SNF11	YDR073W	ANT1	Q06497	328 aa		3.69	□□□□□ -1.82
SNF11	YDR073W	ATG10	Q07879	167 aa		3.69	□□□□□ -1.82
SNF11	YDR073W	MDS3	P53094	1487 aa		3.68	□□□□□ -1.82
SNF11	YDR073W	SEC11	P15367	167 aa		3.68	□□□□□ -1.82
SNF11	YDR073W	GSP2	P32836	220 aa	Known RBP	3.68	□□□□□ -1.82
SNF11	YDR073W	AYR1	P40471	297 aa		3.68	□□□□□ -1.82
SNF11	YDR073W	DML1	Q03652	475 aa		3.68	□□□□□ -1.82
SNF11	YDR073W	MIX17	Q03667	156 aa		3.68	□□□□□ -1.82
SNF11	YDR073W	RNH202	Q05635	350 aa		3.68	□□□□□ -1.82
SNF11	YDR073W	YPR114W	Q06107	315 aa		3.68	□□□□□ -1.82
SNF11	YDR073W	YLR422W	Q06409	1932 aa		3.68	□□□□□ -1.82
SNF11	YDR073W	DDR48	P18899	430 aa	Known RBP	3.67	□□□□□ -1.82
SNF11	YDR073W	PAC10	P48363	199 aa		3.67	□□□□□ -1.82
SNF11	YDR073W	KNH1	P50112	268 aa		3.67	□□□□□ -1.82
SNF11	YDR073W	YOL162W	P0CF19	215 aa		3.66	□□□□□ -1.82
SNF11	YDR073W	YPT31	P38555	223 aa	Known RBP	3.66	□□□□□ -1.82
SNF11	YDR073W	MOB1	P40484	314 aa		3.66	□□□□□ -1.82
SNF11	YDR073W	EMC4	P53073	190 aa		3.66	□□□□□ -1.82
SNF11	YDR073W	GEP7	P53171	287 aa		3.66	□□□□□ -1.82
SNF11	YDR073W	ATG41	Q12048	136 aa		3.66	□□□□□ -1.82
SNF11	YDR073W	MSB2	P32334	1306 aa		3.66	□□□□□ -1.82
SNF11	YDR073W	DDI2	P0CH63	225 aa		3.65	□□□□□ -1.83
SNF11	YDR073W	DDI3	P0CH64	225 aa		3.65	□□□□□ -1.83
SNF11	YDR073W	MRS4	P23500	304 aa		3.65	□□□□□ -1.83
SNF11	YDR073W	HYM1	P32464	399 aa		3.64	□□□□□ -1.83
SNF11	YDR073W	RPL14A	P36105	138 aa	Known RBP	3.64	□□□□□ -1.83
SNF11	YDR073W	RPL14B	P38754	138 aa	Known RBP	3.64	□□□□□ -1.83
SNF11	YDR073W	NSE4	P43124	402 aa		3.64	□□□□□ -1.83
SNF11	YDR073W	SPG1	P50088	95 aa		3.64	□□□□□ -1.83
SNF11	YDR073W	POP3	P53833	195 aa	Predicted RBP	3.64	□□□□□ -1.83
SNF11	YDR073W	UPS1	Q05776	175 aa		3.64	□□□□□ -1.83
SNF11	YDR073W	YIR021W-A	Q3E739	70 aa		3.64	□□□□□ -1.83
SNF11	YDR073W	NOP1	P15646	327 aa	Known RBP	3.63	□□□□□ -1.83
SNF11	YDR073W	TRS20	P38334	175 aa		3.63	□□□□□ -1.83
SNF11	YDR073W	SFT1	P43682	97 aa		3.63	□□□□□ -1.83
SNF11	YDR073W	YML079W	Q03629	201 aa		3.63	□□□□□ -1.83
SNF11	YDR073W	MDH2	P22133	377 aa		3.62	□□□□□ -1.83
SNF11	YDR073W	RPS1B	P23248	255 aa	Known RBP	3.62	□□□□□ -1.83
SNF11	YDR073W	YBL010C	P32788	280 aa		3.62	□□□□□ -1.83
SNF11	YDR073W	YHL018W	P38744	120 aa	Predicted RBP	3.62	□□□□□ -1.83
SNF11	YDR073W	DSE2	P38844	325 aa		3.62	□□□□□ -1.83
SNF11	YDR073W	HPM1	P40481	377 aa		3.62	□□□□□ -1.83
SNF11	YDR073W	THG1	P53215	237 aa	Known RBP	3.62	□□□□□ -1.83
SNF11	YDR073W	DAD4	P69851	72 aa		3.62	□□□□□ -1.83
SNF11	YDR073W	ATP19	P81451	68 aa		3.62	□□□□□ -1.83
SNF11	YDR073W	APS2	Q00381	147 aa		3.62	□□□□□ -1.83
SNF11	YDR073W	SML1	Q04964	104 aa		3.62	□□□□□ -1.83
SNF11	YDR073W	COX8	P04039	78 aa		3.61	□□□□□ -1.83
SNF11	YDR073W	ELC1	Q03071	99 aa		3.61	□□□□□ -1.83
SNF11	YDR073W	HRT1	Q08273	121 aa		3.61	□□□□□ -1.83
SNF11	YDR073W	YLR099W-A	Q3E798	87 aa		3.61	□□□□□ -1.83
SNF11	YDR073W	SPS2	P08459	502 aa		3.6	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms