RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeastyeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGK1YCR012W UIP3P39547 235 aa5.03□□□□□ -1.6
PGK1YCR012W SEC24P40482 926 aaKnown RBP5.03□□□□□ -1.6
PGK1YCR012W RPL9BP51401 191 aaKnown RBP5.03□□□□□ -1.6
PGK1YCR012W CPD1P53314 239 aa5.03□□□□□ -1.6
PGK1YCR012W DUG3P53871 357 aa5.03□□□□□ -1.6
PGK1YCR012W IZH1Q03419 316 aa5.03□□□□□ -1.6
PGK1YCR012W PKR1Q03880 122 aaKnown RBP5.03□□□□□ -1.6
PGK1YCR012W YDR114CQ04597 100 aa5.03□□□□□ -1.6
PGK1YCR012W NAT5Q08689 176 aa5.03□□□□□ -1.6
PGK1YCR012W RNH203Q12338 110 aa5.03□□□□□ -1.6
PGK1YCR012W YOS1Q3E834 85 aa5.03□□□□□ -1.6
PGK1YCR012W YCL001W-BQ96VH2 84 aa5.03□□□□□ -1.6
PGK1YCR012W HMRA1P0CY11 126 aa5.02□□□□□ -1.61
PGK1YCR012W HSP12P22943 109 aaKnown RBP5.02□□□□□ -1.61
PGK1YCR012W QRI5P32344 111 aa5.02□□□□□ -1.61
PGK1YCR012W FPR2P32472 135 aa5.02□□□□□ -1.61
PGK1YCR012W YKL187CP34231 750 aa5.02□□□□□ -1.61
PGK1YCR012W YKL102CP34249 101 aa5.02□□□□□ -1.61
PGK1YCR012W PAU16P35994 123 aa5.02□□□□□ -1.61
PGK1YCR012W PAM17P36147 197 aa5.02□□□□□ -1.61
PGK1YCR012W AME1P38313 324 aa5.02□□□□□ -1.61
PGK1YCR012W YAR068WP39564 161 aa5.02□□□□□ -1.61
PGK1YCR012W YER134CP40081 178 aa5.02□□□□□ -1.61
PGK1YCR012W RPA43P46669 326 aa5.02□□□□□ -1.61
PGK1YCR012W SSU72P53538 206 aaPredicted RBP5.02□□□□□ -1.61
PGK1YCR012W DMA2P53924 522 aa5.02□□□□□ -1.61
PGK1YCR012W YHP1Q04116 353 aa5.02□□□□□ -1.61
PGK1YCR012W TRI1Q05024 226 aa5.02□□□□□ -1.61
PGK1YCR012W POS5Q06892 414 aa5.02□□□□□ -1.61
PGK1YCR012W YOL024WQ08172 172 aa5.02□□□□□ -1.61
PGK1YCR012W WTM2Q12206 467 aa5.02□□□□□ -1.61
PGK1YCR012W YCR024C-BQ3E7Z8 88 aa5.02□□□□□ -1.61
PGK1YCR012W YLR302CO13544 120 aa5.01□□□□□ -1.61
PGK1YCR012W DFR1P07807 211 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
PGK1YCR012W HAP3P13434 144 aa5.01□□□□□ -1.61
PGK1YCR012W CUP2P15315 225 aa5.01□□□□□ -1.61
PGK1YCR012W NNK1P36003 928 aa5.01□□□□□ -1.61
PGK1YCR012W DOG1P38774 246 aa5.01□□□□□ -1.61
PGK1YCR012W YHR173CP38864 112 aa5.01□□□□□ -1.61
PGK1YCR012W SUR7P54003 302 aa5.01□□□□□ -1.61
PGK1YCR012W TPT1Q12272 230 aaKnown RBP5.01□□□□□ -1.61
PGK1YCR012W HEM4P06174 275 aa5□□□□□ -1.61
PGK1YCR012W PIS1P06197 220 aaKnown RBP5□□□□□ -1.61
PGK1YCR012W NOP1P15646 327 aaKnown RBP5□□□□□ -1.61
PGK1YCR012W VMA16P23968 213 aa5□□□□□ -1.61
PGK1YCR012W YBR090CP38253 122 aa5□□□□□ -1.61
PGK1YCR012W ICS2P38284 255 aa5□□□□□ -1.61
PGK1YCR012W RPS26AP39938 119 aaKnown RBP5□□□□□ -1.61
PGK1YCR012W RPS26BP39939 119 aaKnown RBP5□□□□□ -1.61
PGK1YCR012W PRE5P40302 234 aaKnown RBP5□□□□□ -1.61
PGK1YCR012W ATP19P81451 68 aa5□□□□□ -1.61
PGK1YCR012W CNL1Q06333 122 aa5□□□□□ -1.61
PGK1YCR012W GCN1P33892 2672 aaKnown RBP5□□□□□ -1.61
PGK1YCR012W YER190C-BP0CX94 160 aa4.99□□□□□ -1.61
PGK1YCR012W YEL077W-AP0CX95 160 aa4.99□□□□□ -1.61
PGK1YCR012W YGR296C-BP0CX96 160 aa4.99□□□□□ -1.61
PGK1YCR012W YPL283W-BP0CX97 160 aa4.99□□□□□ -1.61
PGK1YCR012W YPR204C-AP0CX98 160 aa4.99□□□□□ -1.61
PGK1YCR012W PMU1P36069 295 aa4.99□□□□□ -1.61
PGK1YCR012W TEM1P38987 245 aa4.99□□□□□ -1.61
PGK1YCR012W YJL118WP47022 219 aa4.99□□□□□ -1.61
PGK1YCR012W YNR064CP53750 290 aa4.99□□□□□ -1.61
PGK1YCR012W CWC27Q02770 301 aa4.99□□□□□ -1.61
PGK1YCR012W YMR166CQ03829 368 aa4.99□□□□□ -1.61
PGK1YCR012W PAU23Q07987 124 aa4.99□□□□□ -1.61
PGK1YCR012W WSC3Q12215 556 aa4.99□□□□□ -1.61
PGK1YCR012W PAU17Q12370 124 aa4.99□□□□□ -1.61
PGK1YCR012W FOL3Q12676 427 aaPredicted RBP4.99□□□□□ -1.61
PGK1YCR012W SEC4P07560 215 aaKnown RBP4.98□□□□□ -1.61
PGK1YCR012W TIR1P10863 254 aa4.98□□□□□ -1.61
PGK1YCR012W YFL054CP43549 646 aa4.98□□□□□ -1.61
PGK1YCR012W PIR5P46999 287 aa4.98□□□□□ -1.61
PGK1YCR012W YJL028WP47062 111 aa4.98□□□□□ -1.61
PGK1YCR012W TDA4P47153 279 aa4.98□□□□□ -1.61
PGK1YCR012W YDL183CP48569 320 aa4.98□□□□□ -1.61
PGK1YCR012W YGL118CP53132 145 aa4.98□□□□□ -1.61
PGK1YCR012W COX18P53239 316 aa4.98□□□□□ -1.61
PGK1YCR012W YNR071CP53757 342 aa4.98□□□□□ -1.61
PGK1YCR012W RAV2Q03956 351 aa4.98□□□□□ -1.61
PGK1YCR012W GIM5Q04493 163 aa4.98□□□□□ -1.61
PGK1YCR012W CSI2Q08054 341 aa4.98□□□□□ -1.61
PGK1YCR012W FIT2Q08906 153 aa4.98□□□□□ -1.61
PGK1YCR012W CSM4Q08955 156 aa4.98□□□□□ -1.61
PGK1YCR012W CSF1Q12150 2958 aa4.98□□□□□ -1.61
PGK1YCR012W HTB1P02293 131 aaKnown RBP4.97□□□□□ -1.61
PGK1YCR012W RPS23AP0CX29 145 aaKnown RBP4.97□□□□□ -1.61
PGK1YCR012W RPS23BP0CX30 145 aa4.97□□□□□ -1.61
PGK1YCR012W ATP10P18496 279 aa4.97□□□□□ -1.61
PGK1YCR012W YCR007CP25354 239 aa4.97□□□□□ -1.61
PGK1YCR012W LDB16P25587 256 aa4.97□□□□□ -1.61
PGK1YCR012W ZRT1P32804 376 aa4.97□□□□□ -1.61
PGK1YCR012W GSP1P32835 219 aaKnown RBP4.97□□□□□ -1.61
PGK1YCR012W GSP2P32836 220 aaKnown RBP4.97□□□□□ -1.61
PGK1YCR012W YBL071CP38185 102 aa4.97□□□□□ -1.61
PGK1YCR012W CSH1P38287 376 aa4.97□□□□□ -1.61
PGK1YCR012W BDH1P39714 382 aa4.97□□□□□ -1.61
PGK1YCR012W TVP18Q04767 167 aa4.97□□□□□ -1.61
PGK1YCR012W YDL157CQ12082 118 aa4.97□□□□□ -1.61
PGK1YCR012W TMA7Q3E764 64 aaKnown RBP4.97□□□□□ -1.61
PGK1YCR012W RPL39P04650 51 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms