RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	CDC50	P25656	391 aa		4.46	□□□□□ -1.7
ATG12	YBR217W	YBL059W	P34224	193 aa		4.46	□□□□□ -1.7
ATG12	YBR217W	ASP1	P38986	381 aa	Predicted RBP	4.46	□□□□□ -1.7
ATG12	YBR217W	SIM1	P40472	476 aa		4.46	□□□□□ -1.7
ATG12	YBR217W	MRPL50	P53724	139 aa		4.46	□□□□□ -1.7
ATG12	YBR217W	LRS4	Q04087	347 aa	Known RBP	4.46	□□□□□ -1.7
ATG12	YBR217W	YLR179C	Q06252	201 aa	Known RBP	4.46	□□□□□ -1.7
ATG12	YBR217W	YDR157W	A0A023PZE8	133 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	SPO13	P23624	291 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	AHT1	P29589	182 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	SIP1	P32578	815 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	EMP24	P32803	203 aa	Known RBP	4.45	□□□□□ -1.7
ATG12	YBR217W	MPC2	P38857	129 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	PEX7	P39108	375 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	GCV3	P39726	170 aa	Predicted RBP	4.45	□□□□□ -1.7
ATG12	YBR217W	YGR025W	P53216	100 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	SDH7	Q04401	133 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	MSC3	Q05812	728 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	RRG8	Q06109	277 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	AYT1	Q12226	474 aa		4.45	□□□□□ -1.7
ATG12	YBR217W	COX2	P00410	251 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	UBI4	P0CG63	381 aa	Known RBP	4.44	□□□□□ -1.7
ATG12	YBR217W	SFT2	P38166	215 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	LSM2	P38203	95 aa	Known RBP	4.44	□□□□□ -1.7
ATG12	YBR217W	DER1	P38307	211 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	FLO5	P38894	1075 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	SNF11	P38956	169 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	GET2	P40056	285 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	SRB7	P47822	140 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	GNP1	P48813	663 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	HST4	P53688	370 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	YNR066C	P53752	436 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	YDR274C	P87283	123 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	AVO2	Q04749	426 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	YLR281C	Q05863	155 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	LDS2	Q08218	356 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	YOR015W	Q12169	119 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	YOR011W-A	Q3E807	68 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	YBR298C-A	Q8TGK4	73 aa		4.44	□□□□□ -1.7
ATG12	YBR217W	SRL3	P36167	246 aa		4.43	□□□□□ -1.7
ATG12	YBR217W	SDH4	P37298	181 aa		4.43	□□□□□ -1.7
ATG12	YBR217W	PET100	P38958	111 aa		4.43	□□□□□ -1.7
ATG12	YBR217W	IMP2	P46972	177 aa		4.43	□□□□□ -1.7
ATG12	YBR217W	LCB3	P47013	409 aa		4.43	□□□□□ -1.7
ATG12	YBR217W	TDA4	P47153	279 aa		4.43	□□□□□ -1.7
ATG12	YBR217W	ADD37	Q03233	198 aa		4.43	□□□□□ -1.7
ATG12	YBR217W	MRPS17	Q03246	237 aa	Predicted RBP	4.43	□□□□□ -1.7
ATG12	YBR217W	TRI1	Q05024	226 aa		4.43	□□□□□ -1.7
ATG12	YBR217W	ERS1	P17261	260 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	QCR9	P22289	66 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	TIR2	P33890	251 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	VMA22	P38784	181 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	YIL077C	P40508	320 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	EMC5	P40540	141 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	SAS2	P40963	338 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	GPI2	P46961	280 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	ALG13	P53178	202 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	UBC7	Q02159	165 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	YOL160W	Q08321	113 aa		4.42	□□□□□ -1.7
ATG12	YBR217W	RPS2	P25443	254 aa	Known RBP	4.41	□□□□□ -1.7
ATG12	YBR217W	AUA1	P32450	94 aa		4.41	□□□□□ -1.7
ATG12	YBR217W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
ATG12	YBR217W	CMC1	P36064	111 aa		4.41	□□□□□ -1.7
ATG12	YBR217W	DSK2	P48510	373 aa		4.41	□□□□□ -1.7
ATG12	YBR217W	MIC26	P50087	233 aa		4.41	□□□□□ -1.7
ATG12	YBR217W	ORM1	P53224	222 aa		4.41	□□□□□ -1.7
ATG12	YBR217W	YNR071C	P53757	342 aa		4.41	□□□□□ -1.7
ATG12	YBR217W	FYV6	P53913	173 aa		4.41	□□□□□ -1.7
ATG12	YBR217W	PRM7	Q12459	698 aa		4.41	□□□□□ -1.7
ATG12	YBR217W	MRP2	P10663	115 aa	Predicted RBP	4.4	□□□□□ -1.71
ATG12	YBR217W	NRG2	P38082	220 aa		4.4	□□□□□ -1.71
ATG12	YBR217W	YBR292C	P38357	123 aa		4.4	□□□□□ -1.71
ATG12	YBR217W	AIM24	P47127	394 aa		4.4	□□□□□ -1.71
ATG12	YBR217W	RIB4	P50861	169 aa	Predicted RBP	4.4	□□□□□ -1.71
ATG12	YBR217W	PHO23	P50947	330 aa		4.4	□□□□□ -1.71
ATG12	YBR217W	YIP3	P53633	176 aa		4.4	□□□□□ -1.71
ATG12	YBR217W	YCL001W-A	P87012	153 aa		4.4	□□□□□ -1.71
ATG12	YBR217W	ATC1	Q04005	294 aa		4.4	□□□□□ -1.71
ATG12	YBR217W	COA4	Q05809	96 aa		4.4	□□□□□ -1.71
ATG12	YBR217W	DDI2	P0CH63	225 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	DDI3	P0CH64	225 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	RPL14A	P36105	138 aa	Known RBP	4.39	□□□□□ -1.71
ATG12	YBR217W	TRS20	P38334	175 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	RPL14B	P38754	138 aa	Known RBP	4.39	□□□□□ -1.71
ATG12	YBR217W	YER135C	P40082	130 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	HUA1	P40325	198 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	DUO1	P53168	247 aa	Known RBP	4.39	□□□□□ -1.71
ATG12	YBR217W	CAF40	P53829	373 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	IZH1	Q03419	316 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	SDO1	Q07953	250 aa	Known RBP	4.39	□□□□□ -1.71
ATG12	YBR217W	IZH3	Q07959	543 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	FIT2	Q08906	153 aa		4.39	□□□□□ -1.71
ATG12	YBR217W	RPP1A	P05318	106 aa	Predicted RBP	4.38	□□□□□ -1.71
ATG12	YBR217W	RPS8A	P0CX39	200 aa	Known RBP	4.38	□□□□□ -1.71
ATG12	YBR217W	RPS8B	P0CX40	200 aa	Known RBP	4.38	□□□□□ -1.71
ATG12	YBR217W	HSP12	P22943	109 aa	Known RBP	4.38	□□□□□ -1.71
ATG12	YBR217W	PRE9	P23638	258 aa	Known RBP	4.38	□□□□□ -1.71
ATG12	YBR217W	PHD1	P36093	366 aa		4.38	□□□□□ -1.71
ATG12	YBR217W	SPC25	P40014	221 aa		4.38	□□□□□ -1.71
ATG12	YBR217W	SCW10	Q04951	389 aa		4.38	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms