RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W YGR219WP53307 113 aa2.5□□□□□ -2.01
PHO88YBR106W LSM7P53905 115 aaKnown RBP2.5□□□□□ -2.01
PHO88YBR106W RAV2Q03956 351 aa2.5□□□□□ -2.01
PHO88YBR106W LPP1Q04396 274 aa2.5□□□□□ -2.01
PHO88YBR106W SDH7Q04401 133 aa2.5□□□□□ -2.01
PHO88YBR106W YMR253CQ04835 414 aa2.5□□□□□ -2.01
PHO88YBR106W YLR179CQ06252 201 aaKnown RBP2.5□□□□□ -2.01
PHO88YBR106W PRP11Q07350 266 aaPredicted RBP2.5□□□□□ -2.01
PHO88YBR106W PSF1Q12488 208 aa2.5□□□□□ -2.01
PHO88YBR106W YCL001W-BQ96VH2 84 aa2.5□□□□□ -2.01
PHO88YBR106W PRP8P33334 2413 aaKnown RBP2.49□□□□□ -2.01
PHO88YBR106W UBI4P0CG63 381 aaKnown RBP2.49□□□□□ -2.01
PHO88YBR106W GPA2P10823 449 aa2.49□□□□□ -2.01
PHO88YBR106W AHC2P25649 128 aa2.49□□□□□ -2.01
PHO88YBR106W HYM1P32464 399 aa2.49□□□□□ -2.01
PHO88YBR106W YBR242WP38331 238 aa2.49□□□□□ -2.01
PHO88YBR106W RPS20P38701 121 aaKnown RBP2.49□□□□□ -2.01
PHO88YBR106W YHL026CP38740 315 aa2.49□□□□□ -2.01
PHO88YBR106W AST2P39945 430 aaKnown RBP2.49□□□□□ -2.01
PHO88YBR106W HMF1P40037 129 aaKnown RBP2.49□□□□□ -2.01
PHO88YBR106W RPA43P46669 326 aa2.49□□□□□ -2.01
PHO88YBR106W GON7P46984 123 aa2.49□□□□□ -2.01
PHO88YBR106W ORM1P53224 222 aa2.49□□□□□ -2.01
PHO88YBR106W GPI17Q04080 534 aa2.49□□□□□ -2.01
PHO88YBR106W YDR391CQ04170 232 aa2.49□□□□□ -2.01
PHO88YBR106W HRD1Q08109 551 aa2.49□□□□□ -2.01
PHO88YBR106W YOR342CQ12182 319 aa2.49□□□□□ -2.01
PHO88YBR106W FKS1P38631 1876 aaKnown RBP2.49□□□□□ -2.01
PHO88YBR106W SIR2P06700 562 aa2.48□□□□□ -2.01
PHO88YBR106W SEC4P07560 215 aaKnown RBP2.48□□□□□ -2.01
PHO88YBR106W RPS23AP0CX29 145 aaKnown RBP2.48□□□□□ -2.01
PHO88YBR106W RPS23BP0CX30 145 aa2.48□□□□□ -2.01
PHO88YBR106W SEC14P24280 304 aaKnown RBP2.48□□□□□ -2.01
PHO88YBR106W YBL010CP32788 280 aa2.48□□□□□ -2.01
PHO88YBR106W YEA4P40004 342 aa2.48□□□□□ -2.01
PHO88YBR106W CWC27Q02770 301 aa2.48□□□□□ -2.01
PHO88YBR106W SHH4Q06236 168 aa2.48□□□□□ -2.01
PHO88YBR106W SUE1Q06524 206 aa2.48□□□□□ -2.01
PHO88YBR106W YDR524C-BQ3E6R4 66 aa2.48□□□□□ -2.01
PHO88YBR106W PDR18P53756 1333 aa2.47□□□□□ -2.01
PHO88YBR106W CDC7P06243 507 aa2.47□□□□□ -2.01
PHO88YBR106W NSP1P14907 823 aaKnown RBP2.47□□□□□ -2.01
PHO88YBR106W YKL102CP34249 101 aa2.47□□□□□ -2.01
PHO88YBR106W MRPL24P36525 258 aaPredicted RBP2.47□□□□□ -2.01
PHO88YBR106W YBR220CP38318 560 aa2.47□□□□□ -2.01
PHO88YBR106W IRC22P40006 225 aa2.47□□□□□ -2.01
PHO88YBR106W GLR1P41921 483 aaKnown RBP2.47□□□□□ -2.01
PHO88YBR106W YGL101WP53144 215 aa2.47□□□□□ -2.01
PHO88YBR106W SAE3P89114 91 aa2.47□□□□□ -2.01
PHO88YBR106W RSM10Q03201 203 aa2.47□□□□□ -2.01
PHO88YBR106W YOR268CQ08734 132 aa2.47□□□□□ -2.01
PHO88YBR106W FEX1Q08913 375 aa2.47□□□□□ -2.01
PHO88YBR106W FEX2Q08991 375 aa2.47□□□□□ -2.01
PHO88YBR106W TDA8Q6B2U8 126 aa2.47□□□□□ -2.01
PHO88YBR106W IRA1P18963 3092 aa2.46□□□□□ -2.02
PHO88YBR106W RPL26AP05743 127 aaKnown RBP2.46□□□□□ -2.02
PHO88YBR106W YPR170W-BP0C5R9 85 aa2.46□□□□□ -2.02
PHO88YBR106W SNF4P12904 322 aa2.46□□□□□ -2.02
PHO88YBR106W URA5P13298 226 aaKnown RBP2.46□□□□□ -2.02
PHO88YBR106W CKS1P20486 150 aaKnown RBP2.46□□□□□ -2.02
PHO88YBR106W MED6P38782 295 aa2.46□□□□□ -2.02
PHO88YBR106W AIM2P39721 246 aa2.46□□□□□ -2.02
PHO88YBR106W APQ12P40532 138 aa2.46□□□□□ -2.02
PHO88YBR106W SER2P42941 309 aa2.46□□□□□ -2.02
PHO88YBR106W RPL26BP53221 127 aaKnown RBP2.46□□□□□ -2.02
PHO88YBR106W CAB4P53332 305 aa2.46□□□□□ -2.02
PHO88YBR106W LSM3P57743 89 aaKnown RBP2.46□□□□□ -2.02
PHO88YBR106W HHT1P61830 136 aa2.46□□□□□ -2.02
PHO88YBR106W AIM36Q03798 255 aa2.46□□□□□ -2.02
PHO88YBR106W PLP1Q04004 230 aa2.46□□□□□ -2.02
PHO88YBR106W TRM12Q04235 462 aa2.46□□□□□ -2.02
PHO88YBR106W DGA1Q08650 418 aa2.46□□□□□ -2.02
PHO88YBR106W YLR099W-AQ3E798 87 aa2.46□□□□□ -2.02
PHO88YBR106W YER039C-AP0CD97 72 aa2.45□□□□□ -2.02
PHO88YBR106W PBI2P0CT04 75 aaKnown RBP2.45□□□□□ -2.02
PHO88YBR106W RPL30P14120 105 aaKnown RBP2.45□□□□□ -2.02
PHO88YBR106W CNB1P25296 175 aa2.45□□□□□ -2.02
PHO88YBR106W MIG1P27705 504 aa2.45□□□□□ -2.02
PHO88YBR106W MRP49P32388 137 aa2.45□□□□□ -2.02
PHO88YBR106W AGA2P32781 87 aa2.45□□□□□ -2.02
PHO88YBR106W PAN3P36102 679 aaPredicted RBP2.45□□□□□ -2.02
PHO88YBR106W VMA7P39111 118 aa2.45□□□□□ -2.02
PHO88YBR106W AYR1P40471 297 aa2.45□□□□□ -2.02
PHO88YBR106W MNN5P46982 586 aa2.45□□□□□ -2.02
PHO88YBR106W YJL144WP47009 104 aa2.45□□□□□ -2.02
PHO88YBR106W DSK2P48510 373 aa2.45□□□□□ -2.02
PHO88YBR106W ARO8P53090 500 aaKnown RBP2.45□□□□□ -2.02
PHO88YBR106W YGR050CP53231 118 aa2.45□□□□□ -2.02
PHO88YBR106W SLM2P53955 656 aa2.45□□□□□ -2.02
PHO88YBR106W COF1Q03048 143 aaKnown RBP2.45□□□□□ -2.02
PHO88YBR106W HPT1Q04178 221 aaKnown RBP2.45□□□□□ -2.02
PHO88YBR106W PRM7Q12459 698 aa2.45□□□□□ -2.02
PHO88YBR106W MBF1O14467 151 aaKnown RBP2.44□□□□□ -2.02
PHO88YBR106W MSW1P04803 379 aa2.44□□□□□ -2.02
PHO88YBR106W ADK1P07170 222 aaKnown RBP2.44□□□□□ -2.02
PHO88YBR106W NOP1P15646 327 aaKnown RBP2.44□□□□□ -2.02
PHO88YBR106W BET1P22804 142 aa2.44□□□□□ -2.02
PHO88YBR106W SNC2P33328 115 aa2.44□□□□□ -2.02
PHO88YBR106W SHE2P36068 246 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
PHO88YBR106W SPO73P40031 143 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 92.4 ms