RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 PODXLO00592 558 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 B4GALT3O60512 393 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 MICAL2O94851 1124 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 KIF4AO95239 1232 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 GJB6O95452 261 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 VDRP11473 427 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 COL6A1P12109 1028 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 PRLRP16471 622 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 LMO2P25791 158 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 FAAP100Q0VG06 881 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 TRIM60Q495X7 471 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 ANKRD33Q7Z3H0 272 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 ACOT1Q86TX2 421 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 HEXIM2Q96MH2 286 aaKnown RBP18.68■□□□□ 0.58
PHGDH-232ENST00000641947 UVRAGQ9P2Y5 699 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 INPP5FQ9Y2H2 1132 aa18.68■□□□□ 0.58
PHGDH-232ENST00000641947 FAM189BP81408 668 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 C1QBPQ07021 282 aaKnown RBP18.67■□□□□ 0.58
PHGDH-232ENST00000641947 PTPN20Q4JDL3 420 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 PLEKHG4Q58EX7 1191 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 CLLU1OSQ5K130 101 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 C11orf63Q6NUN7 778 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 SLC24A5Q71RS6 500 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 DPH6Q7L8W6 267 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 PDCL2Q8N4E4 241 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 TTC39CQ8N584 583 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 TMEM35BQ8NCS4 154 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 MNS1Q8NEH6 495 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 DBF4BQ8NFT6 615 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 OR6B3Q8NGW1 331 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 ARMC5Q96C12 935 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 PGBD4Q96DM1 585 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 HES6Q96HZ4 224 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 SCLYQ96I15 445 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 WNT8AQ9H1J5 351 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 LHX5Q9H2C1 402 aa18.67■□□□□ 0.58
PHGDH-232ENST00000641947 FNDC1Q4ZHG4 1894 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-232ENST00000641947 TCRBV5S1A1TA0A578 114 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 TMEM110-MUSTN1A8MSY1 372 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 INPPL1O15357 1258 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 MED7O43513 233 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 MYBL1P10243 752 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 SKIP12755 728 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 LBX1P52954 281 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 UPP1Q16831 310 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 SGO2Q562F6 1265 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 PPP1R26Q5T8A7 1209 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-232ENST00000641947 CD300LGQ6UXG3 332 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 PEX26Q7Z412 305 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 TRIM11Q96F44 468 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 VCPIP1Q96JH7 1222 aa18.66■□□□□ 0.58
PHGDH-232ENST00000641947 M0QYV0 167 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 PFKMP08237 780 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 TLE2Q04725 743 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 MAMLD1Q13495 774 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 MESDQ14696 234 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 CNGA2Q16280 664 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 CCDC142Q17RM4 750 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 CYP4A22Q5TCH4 519 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 PLEKHA7Q6IQ23 1121 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 ADGRF2Q8IZF7 708 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 SYCE1Q8N0S2 351 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 APPL2Q8NEU8 664 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 UBA3Q8TBC4 463 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 MS4A14Q96JA4 679 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 ZNF518BQ9C0D4 1074 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 FAM49BQ9NUQ9 324 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 TSPAN16Q9UKR8 245 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 ALG6Q9Y672 507 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 A8MXQ7 604 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 F8W810 466 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 DDX3YO15523 660 aaKnown RBP18.65■□□□□ 0.58
PHGDH-232ENST00000641947 PDGFRBP09619 1106 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 TCP1P17987 556 aaKnown RBP18.65■□□□□ 0.58
PHGDH-232ENST00000641947 GPD2P43304 727 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 GRIK3Q13003 919 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 RPS6KA1Q15418 735 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 ERCC6LQ2NKX8 1250 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 LCLAT1Q6UWP7 414 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 RSRC2Q7L4I2 434 aaKnown RBP18.65■□□□□ 0.58
PHGDH-232ENST00000641947 UNC93AQ86WB7 457 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 TOP6BLQ8N6T0 577 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 CPXM1Q96SM3 734 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 UBN1Q9NPG3 1134 aa18.65■□□□□ 0.58
PHGDH-232ENST00000641947 CYB561D2O14569 222 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 HUS1O60921 280 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 EOMESO95936 686 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 COMTP21964 271 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 WARSP23381 471 aaKnown RBP18.64■□□□□ 0.57
PHGDH-232ENST00000641947 MARCKSL1P49006 195 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 CCL23P55773 120 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 GOLGA7BQ2TAP0 167 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 DCAF12L1Q5VU92 463 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 WSCD1Q658N2 575 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 TTC30AQ86WT1 665 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 CEP112Q8N8E3 955 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 SENP8Q96LD8 212 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 PPP1R12CQ9BZL4 782 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 HIPK3Q9H422 1215 aa18.64■□□□□ 0.57
PHGDH-232ENST00000641947 ANAPC7Q9UJX3 599 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms