RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SNCBQ16143 134 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 SLFN12LQ6IEE8 588 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 SYDE1Q6ZW31 735 aaPredicted RBP17.77■□□□□ 0.43
PHGDH-223ENST00000641597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.77■□□□□ 0.43
PHGDH-223ENST00000641597 MAIP1Q8WWC4 291 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 HMGXB4Q9UGU5 601 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 IP6K2Q9UHH9 426 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 BAIAP2L1Q9UHR4 511 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 SCINQ9Y6U3 715 aa17.77■□□□□ 0.43
PHGDH-223ENST00000641597 A0A1W2PPM1 405 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 SGK1O00141 431 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 DNAJC8O75937 253 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-223ENST00000641597 MAN1A1P33908 653 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 OAZ1P54368 228 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 ANKRD22Q5VYY1 191 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 CROCCP2Q86T23 111 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 ZCCHC9Q8N567 271 aaKnown RBP17.76■□□□□ 0.43
PHGDH-223ENST00000641597 MAML1Q92585 1016 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 PRCCQ92733 491 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-223ENST00000641597 VPS37BQ9H9H4 285 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-223ENST00000641597 SSC5DA1L4H1 1573 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 H0YCG3 227 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 CDH16O75309 829 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 GHRP10912 638 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 CD19P15391 556 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 TBXAS1P24557 533 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-223ENST00000641597 NCALDP61601 193 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 DNAJC3Q13217 504 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 PTPN20Q4JDL3 420 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 MSS51Q4VC12 460 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 EEF1DP3Q658K8 133 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 TRIM72Q6ZMU5 477 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 BRSK2Q8IWQ3 736 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 C12orf42Q96LP6 360 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 NIFKQ9BYG3 293 aaKnown RBP17.76■□□□□ 0.43
PHGDH-223ENST00000641597 IMPG2Q9BZV3 1241 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 VPS33BQ9H267 617 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 PCSK1NQ9UHG2 260 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 CEP350Q5VT06 3117 aa17.76■□□□□ 0.43
PHGDH-223ENST00000641597 KRT19P08727 400 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 SWT1Q5T5J6 900 aaKnown RBP17.75■□□□□ 0.43
PHGDH-223ENST00000641597 DPH6Q7L8W6 267 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 SPATA21Q7Z572 469 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 NCAPG2Q86XI2 1143 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 ALLCQ8N6M5 410 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 CCDC63Q8NA47 563 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 NLRP4Q96MN2 994 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 hCG_1818297A0A087WSY0 165 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 IGKV6D-21A0A0A0MT36 114 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 DNALI1O14645 258 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-223ENST00000641597 FGFR1P11362 822 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 TAC1P20366 129 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 CDKN2BP42772 138 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 LAMTOR4Q0VGL1 99 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 RHPN2Q8IUC4 686 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 LRRN4Q8WUT4 740 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 COPS5Q92905 334 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 VCPIP1Q96JH7 1222 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 TWNKQ96RR1 684 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 MINDY3Q9H8M7 445 aa17.75■□□□□ 0.43
PHGDH-223ENST00000641597 TCRBV7S3A2A0A539 114 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 SSTR1P30872 391 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 ASPAP45381 313 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 PDIA2Q13087 525 aaKnown RBP17.74■□□□□ 0.43
PHGDH-223ENST00000641597 RCOR2Q8IZ40 523 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 NSRP1Q9H0G5 558 aaKnown RBP17.74■□□□□ 0.43
PHGDH-223ENST00000641597 ECT2Q9H8V3 914 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 L3MBTL1Q9Y468 752 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 ZBTB42B2RXF5 422 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 ABLIM1O14639 778 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 ATP2A1O14983 1001 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 CHUKO15111 745 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 MGRN1O60291 552 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 LDHAP00338 332 aaKnown RBP17.74■□□□□ 0.43
PHGDH-223ENST00000641597 HOXC6P09630 235 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 IQCF3P0C7M6 154 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 RPA3P35244 121 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-223ENST00000641597 CAV1Q03135 178 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 OASLQ15646 514 aaKnown RBP17.74■□□□□ 0.43
PHGDH-223ENST00000641597 ERICH1Q86X53 443 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 KLF6Q99612 283 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-223ENST00000641597 ACO2Q99798 780 aaKnown RBP17.74■□□□□ 0.43
PHGDH-223ENST00000641597 WDR83Q9BRX9 315 aaKnown RBP17.74■□□□□ 0.43
PHGDH-223ENST00000641597 NIF3L1Q9GZT8 377 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 XYLT2Q9H1B5 865 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 HOXC10Q9NYD6 342 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 LGALS13Q9UHV8 139 aa17.74■□□□□ 0.43
PHGDH-223ENST00000641597 IGF2BP3O00425 579 aaKnown RBP eCLIP17.73■□□□□ 0.43
PHGDH-223ENST00000641597 TOM1L1O75674 476 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 TJP3O95049 919 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 CXCL8P10145 99 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 EAPPQ56P03 285 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-223ENST00000641597 PPP1R15BQ5SWA1 713 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 SH3PXD2AQ5TCZ1 1133 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 ECHDC2Q86YB7 292 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 ACTL9Q8TC94 416 aa17.73■□□□□ 0.43
PHGDH-223ENST00000641597 C3orf70A6NLC5 250 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-223ENST00000641597 C19orf81C9J6K1 198 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms