RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 MYBL2P10244 700 aa18.31■□□□□ 0.52
PHGDH-208ENST00000641023 CYP3A5P20815 502 aa18.31■□□□□ 0.52
PHGDH-208ENST00000641023 MAN1A1P33908 653 aa18.31■□□□□ 0.52
PHGDH-208ENST00000641023 PNPLA4P41247 253 aa18.31■□□□□ 0.52
PHGDH-208ENST00000641023 NFX1Q12986 1120 aaKnown RBP18.31■□□□□ 0.52
PHGDH-208ENST00000641023 CCSAPQ6IQ19 270 aaPredicted RBP18.31■□□□□ 0.52
PHGDH-208ENST00000641023 RNF180Q86T96 592 aa18.31■□□□□ 0.52
PHGDH-208ENST00000641023 C3orf20Q8ND61 904 aa18.31■□□□□ 0.52
PHGDH-208ENST00000641023 ST3GAL5Q9UNP4 418 aa18.31■□□□□ 0.52
PHGDH-208ENST00000641023 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.31■□□□□ 0.52
PHGDH-208ENST00000641023 TMEM191CA6NGB0 347 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 PIRO00625 290 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 STILQ15468 1287 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 PTGISQ16647 500 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 FBXO47Q5MNV8 452 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 AADACL2Q6P093 401 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 RHOT1Q8IXI2 618 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 ZNF560Q96MR9 790 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 SENP6Q9GZR1 1112 aaPredicted RBP18.3■□□□□ 0.52
PHGDH-208ENST00000641023 SYNCQ9H7C4 482 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 WDR35Q9P2L0 1181 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 AMACRQ9UHK6 382 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 MTUS1Q9ULD2 1270 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 TCRBV5S1A1TA0A578 114 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 O00370 1275 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 PPEF2O14830 753 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 GPR182O15218 404 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 PSTPIP1O43586 416 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 MICAL2O94851 1124 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 CHRNA1P02708 482 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 CTSHP09668 335 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 EPHB4P54760 987 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 RPL7AP62424 266 aaKnown RBP18.3■□□□□ 0.52
PHGDH-208ENST00000641023 DPH6Q7L8W6 267 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 ADAT2Q7Z6V5 191 aaKnown RBP18.3■□□□□ 0.52
PHGDH-208ENST00000641023 HACE1Q8IYU2 909 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 CD99L2Q8TCZ2 262 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 RAET1EQ8TD07 263 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 AENQ8WTP8 325 aaKnown RBP18.3■□□□□ 0.52
PHGDH-208ENST00000641023 C18orf8Q96DM3 657 aa18.3■□□□□ 0.52
PHGDH-208ENST00000641023 DDX20Q9UHI6 824 aaKnown RBP18.3■□□□□ 0.52
PHGDH-208ENST00000641023 TRIP11Q15643 1979 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 M0QYV0 167 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 CABYRO75952 493 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 GNRH1P01148 92 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 TNNT3P45378 269 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-208ENST00000641023 GPS2Q13227 327 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 PTPN20Q4JDL3 420 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 EMBQ6PCB8 327 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 SLC13A5Q86YT5 568 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-208ENST00000641023 GSPT2Q8IYD1 628 aaKnown RBP18.29■□□□□ 0.52
PHGDH-208ENST00000641023 PXYLP1Q8TE99 480 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 WNT8BQ93098 351 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 MCEEQ96PE7 176 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 PLEKHA4Q9H4M7 779 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 NR2E1Q9Y466 385 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 KPNA7A9QM74 516 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 THPOP40225 353 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 APLP1P51693 650 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 CBX1P83916 185 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 PAK2Q13177 524 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 PIGHQ14442 188 aaPredicted RBP18.29■□□□□ 0.52
PHGDH-208ENST00000641023 LCLAT1Q6UWP7 414 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 UNC93AQ86WB7 457 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 IFT81Q8WYA0 676 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 MRPL45Q9BRJ2 306 aaKnown RBP18.29■□□□□ 0.52
PHGDH-208ENST00000641023 ACBD3Q9H3P7 528 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 VIPAS39Q9H9C1 493 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 FAM105AQ9NUU6 356 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 RNF19AQ9NV58 838 aa18.29■□□□□ 0.52
PHGDH-208ENST00000641023 ZSCAN5CA6NGD5 496 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-208ENST00000641023 GJB6O95452 261 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 KRT3P12035 628 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 MAP2K2P36507 400 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 GPD2P43304 727 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 PLA2G4AP47712 749 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 TAF6P49848 677 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 MGAT3Q09327 533 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 PPP1R15BQ5SWA1 713 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 CYP4A22Q5TCH4 519 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 EIF1ADQ8N9N8 165 aaKnown RBP18.28■□□□□ 0.52
PHGDH-208ENST00000641023 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHGDH-208ENST00000641023 DNAI2Q9GZS0 605 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHGDH-208ENST00000641023 CYTH4Q9UIA0 394 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 NOD1Q9Y239 953 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 USTQ9Y2C2 406 aa18.28■□□□□ 0.52
PHGDH-208ENST00000641023 ESYT3A0FGR9 886 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 SIGLEC16A6NMB1 481 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 CHRNA3P32297 505 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 SSR1P43307 286 aaKnown RBP18.27■□□□□ 0.52
PHGDH-208ENST00000641023 CARSP49589 748 aaKnown RBP18.27■□□□□ 0.52
PHGDH-208ENST00000641023 GSCP56915 257 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-208ENST00000641023 PSMC1P62191 440 aaKnown RBP18.27■□□□□ 0.52
PHGDH-208ENST00000641023 CUL1Q13616 776 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 DHX34Q14147 1143 aaKnown RBP18.27■□□□□ 0.52
PHGDH-208ENST00000641023 ZNF268Q14587 947 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-208ENST00000641023 ARRDC4Q8NCT1 418 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 OR6B3Q8NGW1 331 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms