RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 AGAP1Q9UPQ3 857 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 PVALEFA0A1B0GWK0 134 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 NOP56O00567 594 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 FOSP01100 380 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 GYPCP04921 128 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 PMS1P54277 932 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CTTNQ14247 550 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 ABCB5Q2M3G0 1257 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 ANKRD40Q6AI12 368 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 SCARA3Q6AZY7 606 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 TLDC1Q6P9B6 456 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 TTC23LQ6PF05 361 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 SVOPQ8N4V2 548 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 KAZALD1Q96I82 304 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 NT5C1BQ96P26 610 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CHID1Q9BWS9 393 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 DCLK3Q9C098 648 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 ANKHQ9HCJ1 492 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 RPRD1BQ9NQG5 326 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 ARHGEF3Q9NR81 526 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 WHRNQ9P202 907 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CPDO75976 1380 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L15C9J2P7 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L13C9JLJ4 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L11C9JVI0 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L18D6R9N7 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L22D6RA61 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L17D6RBQ6 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L19D6RCP7 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L20D6RJB6 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 NTRK1P04629 796 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 DRG2P55039 364 aaKnown RBP8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L24Q0WX57 530 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 ST3GAL1Q11201 340 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 KCNH2Q12809 1159 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 ATP1A4Q13733 1029 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 DLGAP5Q15398 846 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CCDC157Q569K6 752 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP17L6PQ6QN14 398 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 CCDC28AQ8IWP9 274 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 MS4A14Q96JA4 679 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 FAIMQ9NVQ4 179 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 TTLL3Q9Y4R7 772 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 GJA3Q9Y6H8 435 aa8.63□□□□□ -1.03
NECAP1-227ENST00000640648 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 A0A0A6YYK5 440 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 FAM172BPA6NC97 362 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 GNGT2O14610 69 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 LPXNO60711 386 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 THRAP10827 490 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ACCSLQ4AC99 568 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 BOLA3Q53S33 107 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TTMPQ5BVD1 217 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TTBK2Q6IQ55 1244 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 IQCKQ8N0W5 287 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 SHCBP1Q8NEM2 672 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 CKAP2Q8WWK9 683 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 RFFLQ8WZ73 363 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 CELF1Q92879 486 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TMEM109Q9BVC6 243 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 DDX18Q9NVP1 670 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ARMC1Q9NVT9 282 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 NMRK1Q9NWW6 199 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 MRPL39Q9NYK5 338 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 HAO1Q9UJM8 370 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 GOLGA8JA6NMD2 632 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TMEM114B3SHH9 223 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 MAGEC1O60732 1142 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 MYCP01106 439 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ATP6V1B1P15313 513 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 HOXD12P35452 270 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 RFX5P48382 616 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 CASP5P51878 434 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 EPHB1P54762 984 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ALDH18A1P54886 795 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 YWHAEP62258 255 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 PTK2Q05397 1052 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 LSAMPQ13449 338 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 SLC18A3Q16572 532 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 SLC10A5Q5PT55 438 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 RBM44Q6ZP01 1051 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 CASKIN2Q8WXE0 1202 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ERGIC2Q96RQ1 377 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 AIFM2Q9BRQ8 373 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 GPATCH1Q9BRR8 931 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 UQCC2Q9BRT2 126 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ZNF577Q9BSK1 485 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 OSBPL11Q9BXB4 747 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 QPCTLQ9NXS2 382 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TUBGCP4Q9UGJ1 667 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 SOX13Q9UN79 622 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 PDZK1P1A8MUH7 402 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 RAD51CO43502 376 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 KATNA1O75449 491 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 RGS20O76081 388 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TDP2O95551 362 aa8.62□□□□□ -1.03
NECAP1-227ENST00000640648 TARSP26639 723 aaKnown RBP8.62□□□□□ -1.03
NECAP1-227ENST00000640648 JADE1Q6IE81 842 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms