RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CLMNQ96JQ2 1002 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 GLIS2Q9BZE0 524 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 USP20Q9Y2K6 914 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 USP15Q9Y4E8 981 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 EEF2KO00418 725 aaKnown RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 MAP3K7O43318 606 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 LY6KQ17RY6 165 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 MIIPQ5JXC2 388 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 CD302Q8IX05 232 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 KLF6Q99612 283 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 ECT2Q9H8V3 914 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 CFAP73A6NFT4 308 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
SCARB2-223ENST00000640640 FAM107AO95990 144 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 CYP2C8P10632 490 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 CPT1AP50416 773 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 GCNT1Q02742 428 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 AMHR2Q16671 573 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 C11orf63Q6NUN7 778 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 ACOT1Q86TX2 421 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 SLC7A14Q8TBB6 771 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 RAET1EQ8TD07 263 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 ZBED2Q9BTP6 218 aa18.4■□□□□ 0.54
SCARB2-223ENST00000640640 LTN1O94822 1766 aa18.39■□□□□ 0.54
SCARB2-223ENST00000640640 H3BRB1 525 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 ZWINTO95229 277 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 RARGP13631 454 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 CLEC16AQ2KHT3 1053 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 ABRAQ8N0Z2 381 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 C4orf32Q8N8J7 132 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 TUT1Q9H6E5 874 aaKnown RBP18.39■□□□□ 0.53
SCARB2-223ENST00000640640 SLC8A2Q9UPR5 921 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 ZNF235Q14590 738 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 PDK1Q15118 436 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 TFDP3Q5H9I0 405 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 VSIG10LQ86VR7 867 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 MAP4K3Q8IVH8 894 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 RIBC1Q8N443 379 aaPredicted RBP18.39■□□□□ 0.53
SCARB2-223ENST00000640640 P2RX7Q99572 595 aaKnown RBP18.39■□□□□ 0.53
SCARB2-223ENST00000640640 TJP2Q9UDY2 1190 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 ZSCAN5CA6NGD5 496 aaPredicted RBP18.39■□□□□ 0.53
SCARB2-223ENST00000640640 TISP43B9A030 160 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 PTK7Q13308 1070 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 DRP2Q13474 957 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 KDELC2Q7Z4H8 507 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 NDUFAF2Q8N183 169 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 MDM1Q8TC05 714 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 WDR18Q9BV38 432 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 WWP1Q9H0M0 922 aa18.39■□□□□ 0.53
SCARB2-223ENST00000640640 EPHB6O15197 1021 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 EPHX2P34913 555 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 FASTKD1Q53R41 847 aaKnown RBP18.38■□□□□ 0.53
SCARB2-223ENST00000640640 GLB1LQ6UWU2 654 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 SEC16BQ96JE7 1060 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 BCL9LQ86UU0 1499 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 CXCL11O14625 94 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 TADA2AO75478 443 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 FAM200BP0CF97 657 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 CXCL8P10145 99 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 INSRRP14616 1297 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 PTPRAP18433 802 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 ALDH5A1P51649 535 aaPredicted RBP18.38■□□□□ 0.53
SCARB2-223ENST00000640640 YWHAHQ04917 246 aaPredicted RBP18.38■□□□□ 0.53
SCARB2-223ENST00000640640 GRAMD1BQ3KR37 738 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 WDR59Q6PJI9 974 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 MTHFD1LQ6UB35 978 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 RNF135Q8IUD6 432 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 ZNF606Q8WXB4 792 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 SMYD3Q9H7B4 428 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 CCDC22O60826 627 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 RECQLP46063 649 aaPredicted RBP18.38■□□□□ 0.53
SCARB2-223ENST00000640640 PTGISQ16647 500 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 KIF19Q2TAC6 998 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 HDAC7Q8WUI4 952 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 SERPINB12Q96P63 405 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 TRIM33Q9UPN9 1127 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 LMNAP02545 664 aaKnown RBP18.38■□□□□ 0.53
SCARB2-223ENST00000640640 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
SCARB2-223ENST00000640640 PTENP60484 403 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 PTPN11Q06124 597 aaPredicted RBP18.38■□□□□ 0.53
SCARB2-223ENST00000640640 PLEKHH3Q7Z736 793 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 ELMO3Q96BJ8 720 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 OPTNQ96CV9 577 aa18.38■□□□□ 0.53
SCARB2-223ENST00000640640 A0A0U1RQJ8 604 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 LSM8O95777 96 aaKnown RBP18.37■□□□□ 0.53
SCARB2-223ENST00000640640 MCL1Q07820 350 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 TATDN1Q6P1N9 297 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 BTNL9Q6UXG8 535 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 CREG2Q8IUH2 290 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 MCOLN2Q8IZK6 566 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 EXD1Q8NHP7 514 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 USP33Q8TEY7 942 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 UPF3AQ9H1J1 476 aaKnown RBP18.37■□□□□ 0.53
SCARB2-223ENST00000640640 STOML1Q9UBI4 398 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 SUN2Q9UH99 717 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 FZD1Q9UP38 647 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 CCDC78A2IDD5 438 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 H3BQF6 201 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 ADCY3O60266 1144 aa18.37■□□□□ 0.53
SCARB2-223ENST00000640640 TSSK1BQ9BXA7 367 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms