RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 ADAMTS10Q9H324 1103 aa8.8□□□□□ -1
PNKP-231ENST00000640501 ASNSD1Q9NWL6 643 aa8.8□□□□□ -1
PNKP-231ENST00000640501 CWC15Q9P013 229 aaKnown RBP8.8□□□□□ -1
PNKP-231ENST00000640501 WHRNQ9P202 907 aa8.8□□□□□ -1
PNKP-231ENST00000640501 ADAM21Q9UKJ8 722 aa8.8□□□□□ -1
PNKP-231ENST00000640501 GINS2Q9Y248 185 aa8.8□□□□□ -1
PNKP-231ENST00000640501 USTQ9Y2C2 406 aa8.8□□□□□ -1
PNKP-231ENST00000640501 EFR3BQ9Y2G0 817 aa8.8□□□□□ -1
PNKP-231ENST00000640501 UMODL1Q5DID0 1318 aa8.8□□□□□ -1
PNKP-231ENST00000640501 ESYT3A0FGR9 886 aa8.79□□□□□ -1
PNKP-231ENST00000640501 BHMG1C9JSJ3 638 aaPredicted RBP8.79□□□□□ -1
PNKP-231ENST00000640501 HAS3O00219 553 aa8.79□□□□□ -1
PNKP-231ENST00000640501 IGF2BP3O00425 579 aaKnown RBP eCLIP8.79□□□□□ -1
PNKP-231ENST00000640501 GPR32O75388 356 aa8.79□□□□□ -1
PNKP-231ENST00000640501 FAM163BP0C2L3 166 aa8.79□□□□□ -1
PNKP-231ENST00000640501 IQCF3P0C7M6 154 aa8.79□□□□□ -1
PNKP-231ENST00000640501 ITGA4P13612 1032 aa8.79□□□□□ -1
PNKP-231ENST00000640501 ITIH2P19823 946 aa8.79□□□□□ -1
PNKP-231ENST00000640501 CYP2B6P20813 491 aa8.79□□□□□ -1
PNKP-231ENST00000640501 PAX3P23760 479 aa8.79□□□□□ -1
PNKP-231ENST00000640501 PTPN7P35236 360 aa8.79□□□□□ -1
PNKP-231ENST00000640501 RAD23BP54727 409 aa8.79□□□□□ -1
PNKP-231ENST00000640501 PSMC1P62191 440 aaKnown RBP8.79□□□□□ -1
PNKP-231ENST00000640501 CCNG2Q16589 344 aa8.79□□□□□ -1
PNKP-231ENST00000640501 SV2CQ496J9 727 aa8.79□□□□□ -1
PNKP-231ENST00000640501 DUPD1Q68J44 220 aa8.79□□□□□ -1
PNKP-231ENST00000640501 ADAT2Q7Z6V5 191 aaKnown RBP8.79□□□□□ -1
PNKP-231ENST00000640501 CDR2LQ86X02 465 aaPredicted RBP8.79□□□□□ -1
PNKP-231ENST00000640501 PRELID2Q8N945 189 aa8.79□□□□□ -1
PNKP-231ENST00000640501 BTBD6Q96KE9 485 aa8.79□□□□□ -1
PNKP-231ENST00000640501 TNIP3Q96KP6 325 aa8.79□□□□□ -1
PNKP-231ENST00000640501 SNX27Q96L92 541 aa8.79□□□□□ -1
PNKP-231ENST00000640501 GDAP1L1Q96MZ0 367 aa8.79□□□□□ -1
PNKP-231ENST00000640501 MCEEQ96PE7 176 aa8.79□□□□□ -1
PNKP-231ENST00000640501 PPP1R16BQ96T49 567 aa8.79□□□□□ -1
PNKP-231ENST00000640501 OSBPL8Q9BZF1 889 aa8.79□□□□□ -1
PNKP-231ENST00000640501 DPH5Q9H2P9 285 aa8.79□□□□□ -1
PNKP-231ENST00000640501 FAM204AQ9H8W3 233 aa8.79□□□□□ -1
PNKP-231ENST00000640501 SLC38A7Q9NVC3 462 aa8.79□□□□□ -1
PNKP-231ENST00000640501 CNTN3Q9P232 1028 aa8.79□□□□□ -1
PNKP-231ENST00000640501 SIX4Q9UIU6 781 aa8.79□□□□□ -1
PNKP-231ENST00000640501 PIN4Q9Y237 131 aaKnown RBP8.79□□□□□ -1
PNKP-231ENST00000640501 FAN1Q9Y2M0 1017 aa8.79□□□□□ -1
PNKP-231ENST00000640501 H3BQF6 201 aa8.78□□□□□ -1
PNKP-231ENST00000640501 M0QYV0 167 aa8.78□□□□□ -1
PNKP-231ENST00000640501 CA12O43570 354 aa8.78□□□□□ -1
PNKP-231ENST00000640501 ECM2O94769 699 aaPredicted RBP8.78□□□□□ -1
PNKP-231ENST00000640501 SYF2O95926 243 aaKnown RBP8.78□□□□□ -1
PNKP-231ENST00000640501 KRT1P04264 644 aa8.78□□□□□ -1
PNKP-231ENST00000640501 IVLP07476 585 aa8.78□□□□□ -1
PNKP-231ENST00000640501 RARBP10826 455 aa8.78□□□□□ -1
PNKP-231ENST00000640501 ATF2P15336 505 aa8.78□□□□□ -1
PNKP-231ENST00000640501 PSMA2P25787 234 aa8.78□□□□□ -1
PNKP-231ENST00000640501 CYP2C19P33261 490 aa8.78□□□□□ -1
PNKP-231ENST00000640501 GABRB2P47870 512 aa8.78□□□□□ -1
PNKP-231ENST00000640501 TM4SF4P48230 202 aa8.78□□□□□ -1
PNKP-231ENST00000640501 MARCKSL1P49006 195 aa8.78□□□□□ -1
PNKP-231ENST00000640501 NDST1P52848 882 aa8.78□□□□□ -1
PNKP-231ENST00000640501 DHX9Q08211 1270 aaKnown RBP8.78□□□□□ -1
PNKP-231ENST00000640501 TFDP3Q5H9I0 405 aa8.78□□□□□ -1
PNKP-231ENST00000640501 FBXO47Q5MNV8 452 aa8.78□□□□□ -1
PNKP-231ENST00000640501 DENND2CQ68D51 928 aa8.78□□□□□ -1
PNKP-231ENST00000640501 LCLAT1Q6UWP7 414 aa8.78□□□□□ -1
PNKP-231ENST00000640501 DPH6Q7L8W6 267 aa8.78□□□□□ -1
PNKP-231ENST00000640501 GSTA5Q7RTV2 222 aa8.78□□□□□ -1
PNKP-231ENST00000640501 MAP7D3Q8IWC1 876 aa8.78□□□□□ -1
PNKP-231ENST00000640501 SLC4A11Q8NBS3 891 aa8.78□□□□□ -1
PNKP-231ENST00000640501 DNAJB3Q8WWF6 145 aa8.78□□□□□ -1
PNKP-231ENST00000640501 DDX27Q96GQ7 796 aaKnown RBP8.78□□□□□ -1
PNKP-231ENST00000640501 SNF8Q96H20 258 aa8.78□□□□□ -1
PNKP-231ENST00000640501 CCDC114Q96M63 670 aa8.78□□□□□ -1
PNKP-231ENST00000640501 ZIM3Q96PE6 472 aa8.78□□□□□ -1
PNKP-231ENST00000640501 OSMRQ99650 979 aa8.78□□□□□ -1
PNKP-231ENST00000640501 SH3GL2Q99962 352 aa8.78□□□□□ -1
PNKP-231ENST00000640501 SNX25Q9H3E2 840 aa8.78□□□□□ -1
PNKP-231ENST00000640501 CYLDQ9NQC7 956 aa8.78□□□□□ -1
PNKP-231ENST00000640501 CHST12Q9NRB3 414 aa8.78□□□□□ -1
PNKP-231ENST00000640501 ASIC3Q9UHC3 531 aa8.78□□□□□ -1
PNKP-231ENST00000640501 POLIQ9UNA4 740 aa8.78□□□□□ -1
PNKP-231ENST00000640501 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.78□□□□□ -1
PNKP-231ENST00000640501 TLL2Q9Y6L7 1015 aa8.78□□□□□ -1
PNKP-231ENST00000640501 MGAMO43451 1857 aa8.78□□□□□ -1
PNKP-231ENST00000640501 ARHGEF37A1IGU5 675 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 ZSCAN5CA6NGD5 496 aaPredicted RBP8.77□□□□□ -1.01
PNKP-231ENST00000640501 SMAPO00193 183 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 HUS1O60921 280 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 PPFIA2O75334 1257 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 ZNF189O75820 626 aaPredicted RBP8.77□□□□□ -1.01
PNKP-231ENST00000640501 MICAL2O94851 1124 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 C6orf222P0C671 652 aaPredicted RBP8.77□□□□□ -1.01
PNKP-231ENST00000640501 RARAP10276 462 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 SKIP12755 728 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 KCNE1P15382 129 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 CAPN2P17655 700 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 HOXD10P28358 340 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 ATP5DP30049 168 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 HSD17B3P37058 310 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 PTGIRP43119 386 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 ACADSBP45954 432 aa8.77□□□□□ -1.01
PNKP-231ENST00000640501 LMAN1P49257 510 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms