RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	FMO1	Q01740	532 aa		18.91	■□□□□ 0.62
SPIN3-238	ENST00000640421	TAS1R1	Q7RTX1	841 aa		18.91	■□□□□ 0.62
SPIN3-238	ENST00000640421	GLYCTK	Q8IVS8	523 aa		18.91	■□□□□ 0.62
SPIN3-238	ENST00000640421	C12orf29	Q8N999	325 aa		18.91	■□□□□ 0.62
SPIN3-238	ENST00000640421	CCDC42	Q96M95	316 aa		18.91	■□□□□ 0.62
SPIN3-238	ENST00000640421	AGPAT1	Q99943	283 aa		18.91	■□□□□ 0.62
SPIN3-238	ENST00000640421	SNX25	Q9H3E2	840 aa		18.91	■□□□□ 0.62
SPIN3-238	ENST00000640421	ADAMTS1	Q9UHI8	967 aa		18.91	■□□□□ 0.62
SPIN3-238	ENST00000640421		A0A087X0T9	212 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	DDX3X	O00571	662 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	ATP2C2	O75185	946 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	ARHGEF15	O94989	841 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	PAEP	P09466	180 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	FAM228B	P0C875	321 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	MYOG	P15173	224 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	GFPT1	Q06210	699 aa	Predicted RBP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	UNC93A	Q86WB7	457 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	SLC39A11	Q8N1S5	342 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	FIBCD1	Q8N539	461 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	TTC39C	Q8N584	583 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	ZNF558	Q96NG5	402 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	PCDHB18P	Q96TA0	734 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	DESI2	Q9BSY9	194 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	DDX43	Q9NXZ2	648 aa	Known RBP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	EPN1	Q9Y6I3	576 aa	Predicted RBP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	TRANK1	O15050	2925 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	SF3B1	O75533	1304 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	THAP12	O43422	761 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	NDUFA10	O95299	355 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	LAG3	P18627	525 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	TYMP	P19971	482 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	CDR1	P51861	262 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	BPIFB4	P59827	614 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	PSMC1	P62191	440 aa	Known RBP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	CDR2	Q01850	454 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	FAM171A1	Q5VUB5	890 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	SPRED2	Q7Z698	418 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	DNAAF5	Q86Y56	855 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	ACRBP	Q8NEB7	543 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	SLC30A5	Q8TAD4	765 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	ZNF606	Q8WXB4	792 aa		18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	CLP1	Q92989	425 aa	Known RBP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	PUF60	Q9UHX1	559 aa	Known RBP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	REXO2	Q9Y3B8	237 aa	Known RBP	18.9	■□□□□ 0.62
SPIN3-238	ENST00000640421	TRAPPC3	O43617	180 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	FAM163B	P0C2L3	166 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	CD19	P15391	556 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	CYP27A1	Q02318	531 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	SMYD5	Q6GMV2	418 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	OVOS1	Q6IE37	1185 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	CCDC170	Q8IYT3	715 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	RNF168	Q8IYW5	571 aa	Predicted RBP	18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	HEXIM2	Q96MH2	286 aa	Known RBP	18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	UBE2O	Q9C0C9	1292 aa	Known RBP	18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	DEF6	Q9H4E7	631 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	NENF	Q9UMX5	172 aa		18.89	■□□□□ 0.61
SPIN3-238	ENST00000640421	AKR1B10	O60218	316 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	FGFR3	P22607	806 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	LHX1	P48742	406 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	RTP2	Q5QGT7	225 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	CEP57	Q86XR8	500 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	CRYBG2	Q8N1P7	616 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	OR10T2	Q8NGX3	314 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	TMEM209	Q96SK2	561 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	CRTAC1	Q9NQ79	661 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	FAM49B	Q9NUQ9	324 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	TAS2R14	Q9NYV8	317 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	DSE	Q9UL01	958 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	NLRC5	Q86WI3	1866 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421		A0A0U1RQJ8	604 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	SYN3	O14994	580 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	YWHAH	Q04917	246 aa	Predicted RBP	18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	BMS1	Q14692	1282 aa	Known RBP	18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	SLC18A3	Q16572	532 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	PASD1	Q8IV76	773 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	B3GALNT2	Q8NCR0	500 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	ATRIP	Q8WXE1	791 aa		18.88	■□□□□ 0.61
SPIN3-238	ENST00000640421	EIF3CL	B5ME19	914 aa	Known RBP	18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421		O00370	1275 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	NRDC	O43847	1150 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	OAZ2	O95190	189 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	LCA5L	O95447	670 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	MRPL58	Q14197	206 aa	Known RBP	18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	VARS2	Q5ST30	1063 aa	Known RBP	18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	METTL23	Q86XA0	190 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	ZNF677	Q86XU0	584 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	SPATA18	Q8TC71	538 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	EIF3C	Q99613	913 aa	Known RBP	18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	SYT15	Q9BQS2	421 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	SEPT11	Q9NVA2	429 aa	Known RBP	18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	ZKSCAN5	Q9Y2L8	839 aa		18.87	■□□□□ 0.61
SPIN3-238	ENST00000640421	LINC01553	A4QN01	128 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	VDR	P11473	427 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	CCDC130	P13994	396 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	PTPN1	P18031	435 aa	Known RBP	18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	TNFAIP3	P21580	790 aa		18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	CYLC1	P35663	651 aa	Predicted RBP	18.86	■□□□□ 0.61
SPIN3-238	ENST00000640421	RGS19	P49795	217 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms