RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 PLS1Q14651 629 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 PPP1R32Q7Z5V6 425 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 RASAL3Q86YV0 1011 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 CAMKK1Q8N5S9 505 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 BRIX1Q8TDN6 353 aaKnown RBP6.18□□□□□ -1.42
CCDC7-216ENST00000640058 FKBP10Q96AY3 582 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 MAP3K14Q99558 947 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 TTYH3Q9C0H2 523 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 PCDHA6Q9UN73 950 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 SPATA31A3Q5VYP0 1347 aa6.18□□□□□ -1.42
CCDC7-216ENST00000640058 WDR27A2RRH5 827 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 RBMXL2O75526 392 aaKnown RBP6.17□□□□□ -1.42
CCDC7-216ENST00000640058 ALDH1L1O75891 902 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 URI1O94763 535 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-216ENST00000640058 ALDH2P05091 517 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 EBLN1P0CF75 366 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 GPD1P21695 349 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 AKAP5P24588 427 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 NKX6-1P78426 367 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-216ENST00000640058 IFIT1BQ5T764 474 aaKnown RBP6.17□□□□□ -1.42
CCDC7-216ENST00000640058 ZKSCAN2Q63HK3 967 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 FAM177A1Q8N128 213 aaPredicted RBP6.17□□□□□ -1.42
CCDC7-216ENST00000640058 HPS3Q969F9 1004 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 PBKQ96KB5 322 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 FAM167AQ96KS9 214 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 SLC46A1Q96NT5 459 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 HAPLN3Q96S86 360 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 OSBPL9Q96SU4 736 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 DKK3Q9UBP4 350 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 STAP2Q9UGK3 403 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 CPA4Q9UI42 421 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 ANKRD6Q9Y2G4 727 aa6.17□□□□□ -1.42
CCDC7-216ENST00000640058 TTLL1O95922 423 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 KCNJ5P48544 419 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 SOX8P57073 446 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 PROK1P58294 105 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 TBCCQ15814 346 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 FAM153CQ494X1 144 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 FAM160B1Q5W0V3 765 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 TMEM108Q6UXF1 575 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 SARAFQ96BY9 339 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 FAM136AQ96C01 138 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 LRGUKQ96M69 825 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 CGRRF1Q99675 332 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 TCF7L1Q9HCS4 588 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 SERHLQ9NQF3 203 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 HESX1Q9UBX0 185 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 ADAM21Q9UKJ8 722 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 FRMD4BQ9Y2L6 1034 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 TNFRSF18Q9Y5U5 241 aa6.16□□□□□ -1.42
CCDC7-216ENST00000640058 PPM1DO15297 605 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 OFD1O75665 1012 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 SOAT2O75908 522 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 ABLIM3O94929 683 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 UNC5CO95185 931 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 PIM1P11309 404 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-216ENST00000640058 VCAM1P19320 739 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 ZNF134P52741 427 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 TCF15Q12870 199 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 TTF1Q15361 905 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-216ENST00000640058 KHDC1LQ5JSQ8 128 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 ZNF788Q6ZQV5 615 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 KLHDC4Q8TBB5 520 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 STAG1Q8WVM7 1258 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 DDX17Q92841 729 aaKnown RBP6.15□□□□□ -1.42
CCDC7-216ENST00000640058 RFKQ969G6 155 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 CDK5RAP3Q96JB5 506 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 NUP88Q99567 741 aaPredicted RBP6.15□□□□□ -1.42
CCDC7-216ENST00000640058 TIMP4Q99727 224 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 RHOBTB2Q9BYZ6 727 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 SARS2Q9NP81 518 aaKnown RBP6.15□□□□□ -1.42
CCDC7-216ENST00000640058 DDX56Q9NY93 547 aaKnown RBP6.15□□□□□ -1.42
CCDC7-216ENST00000640058 STXBP5LQ9Y2K9 1186 aa6.15□□□□□ -1.42
CCDC7-216ENST00000640058 MANSC4A6NHS7 340 aaPredicted RBP6.14□□□□□ -1.43
CCDC7-216ENST00000640058 AP1G1O43747 822 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 PROP1O75360 226 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 DNAJB5O75953 348 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 PDGFRBP09619 1106 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 ZFXP17010 805 aaPredicted RBP6.14□□□□□ -1.43
CCDC7-216ENST00000640058 LMO1P25800 156 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 NHLH1Q02575 133 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 MCL1Q07820 350 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 PIN1Q13526 163 aaPredicted RBP6.14□□□□□ -1.43
CCDC7-216ENST00000640058 ATAT1Q5SQI0 421 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 PLBD2Q8NHP8 589 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 ALG8Q9BVK2 526 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 EHD3Q9NZN3 535 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.14□□□□□ -1.43
CCDC7-216ENST00000640058 WNT6Q9Y6F9 365 aa6.14□□□□□ -1.43
CCDC7-216ENST00000640058 ARHGEF17Q96PE2 2063 aaPredicted RBP6.13□□□□□ -1.43
CCDC7-216ENST00000640058 DCLK1O15075 740 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 ITPKBP27987 946 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 CLCN2P51788 898 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 IGBP1P78318 339 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 LAYNQ6UX15 382 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 FAM109AQ8N4B1 249 aa6.13□□□□□ -1.43
CCDC7-216ENST00000640058 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC7-216ENST00000640058 DIS3LQ8TF46 1054 aaKnown RBP6.13□□□□□ -1.43
CCDC7-216ENST00000640058 MTFMTQ96DP5 389 aaKnown RBP6.13□□□□□ -1.43
CCDC7-216ENST00000640058 RTFDC1Q9BY42 306 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms