RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 ADGRF2Q8IZF7 708 aa5.27□□□□□ -1.57
SCN1A-218ENST00000640036 TBC1D3Q8IZP1 549 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-218ENST00000640036 TTPALQ9BTX7 342 aa5.27□□□□□ -1.57
SCN1A-218ENST00000640036 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN1A-218ENST00000640036 EPS15L1Q9UBC2 864 aa5.27□□□□□ -1.57
SCN1A-218ENST00000640036 PCDHGB4Q9UN71 923 aa5.27□□□□□ -1.57
SCN1A-218ENST00000640036 COG5Q9UP83 839 aa5.27□□□□□ -1.57
SCN1A-218ENST00000640036 TLDC2A0PJX2 215 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 POTEFA5A3E0 1075 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 IL1BP01584 269 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 POTEIP0CG38 1075 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 RBMS1P29558 406 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 NOS2P35228 1153 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 NCOA4Q13772 614 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 WHAMMP3Q1A5X7 153 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 NAALADL2Q58DX5 795 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 EOGTQ5NDL2 527 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 POTEGQ6S5H5 508 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 POTEEQ6S8J3 1075 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 TMTC1Q8IUR5 882 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SYTL1Q8IYJ3 562 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 ATPAF2Q8N5M1 289 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 BBOF1Q8ND07 529 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 ELOVL4Q9GZR5 314 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 IL23AQ9NPF7 189 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 GOLGA8RI6L899 631 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SLC26A4O43511 780 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 H2AFYO75367 372 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 MMP1P03956 469 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 BRAFP15056 766 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 RGS4P49798 205 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SULT1E1P49888 294 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 GTF2A1P52655 376 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SP2Q02086 613 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 CCNG2Q16589 344 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 C11orf74Q86VG3 221 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 CXorf40AQ8TE69 158 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 PXYLP1Q8TE99 480 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 DHX35Q9H5Z1 703 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 COPS7BQ9H9Q2 264 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 FANCFQ9NPI8 374 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 PCMTD2Q9NV79 361 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 NFASCO94856 1347 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 CTAGE15A4D2H0 777 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 POTECB2RU33 542 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SPECC1L-ADORA2AF8WAN1 911 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 EBAG9O00559 213 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 TREHO43280 583 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 RASGRP1O95267 797 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 RPN2P04844 631 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 DARSP14868 501 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 ATP5C1P36542 298 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 DPP6P42658 865 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 BLKP51451 505 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 TAP1Q03518 808 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 EFEMP1Q12805 493 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 MESDQ14696 234 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 ANGPT1Q15389 498 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 PKN1Q16512 942 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 CELF3Q5SZQ8 465 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 ANGPTL8Q6UXH0 198 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 GPR135Q8IZ08 494 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 ZNF248Q8NDW4 579 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SYTL5Q8TDW5 730 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SAAL1Q96ER3 474 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 PLEKHF1Q96S99 279 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 APPL1Q9UKG1 709 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SALL3Q9BXA9 1300 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 JUPP14923 745 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 EPB42P16452 691 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 RRM1P23921 792 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 PSMC6P62333 389 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 LRRC63Q05C16 580 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 HIC1Q14526 733 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 HLA-DQA1Q5Y7H0 255 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SPATS2Q86XZ4 545 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 GIPC2Q8TF65 315 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 HERVK_113Q902F9 699 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 MAML3Q96JK9 1138 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 STK33Q9BYT3 514 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 ARFGAP3Q9NP61 516 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 A1CFQ9NQ94 594 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 TLR9Q9NR96 1032 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 ST3GAL5Q9UNP4 418 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 RUVBL2Q9Y230 463 aaKnown RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 CCDC88CQ9P219 2028 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 LRRD1A4D1F6 860 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 MAPK13O15264 365 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 GPC4O75487 556 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 KRT1P04264 644 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 KRT7P08729 469 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 GABRR2P28476 465 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 NRIP1P48552 1158 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 DUSP3P51452 185 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-218ENST00000640036 SLC12A1Q13621 1099 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 TTLL9Q3SXZ7 439 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 HECTD3Q5T447 861 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 FAXCQ5TGI0 409 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 PLA2G4FQ68DD2 849 aa5.26□□□□□ -1.57
SCN1A-218ENST00000640036 RABEPKQ7Z6M1 372 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms