RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	TRAF7	Q6Q0C0	670 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	CDR2L	Q86X02	465 aa	Predicted RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	ENDOV	Q8N8Q3	282 aa	Known RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	PRELID2	Q8N945	189 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	SLC30A5	Q8TAD4	765 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	CORO1B	Q9BR76	489 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	MRPS26	Q9BYN8	205 aa	Known RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	POTEB3	A0JP26	581 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	AKAP10	O43572	662 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	KLHL41	O60662	606 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	CAMTA2	O94983	1202 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	PEX2	P28328	305 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	CHKA	P35790	457 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	NUDT2	P50583	147 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	GEMIN4	P57678	1058 aa	Known RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	KLRC3	Q07444	240 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	GALNTL6	Q49A17	601 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	MFSD5	Q6N075	450 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	TMEM214	Q6NUQ4	689 aa	Known RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	POTEB	Q6S5H4	581 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	FASTKD5	Q7L8L6	764 aa	Known RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	CCDC103	Q8IW40	242 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	MOSPD1	Q9UJG1	213 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	AP4B1	Q9Y6B7	739 aa		11.87	□□□□□ -0.51
SPIN3-231	ENST00000639895	NEMP1	O14524	444 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	ZBTB11	O95625	1053 aa	Predicted RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	TFPT	P0C1Z6	253 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	DRG2	P55039	364 aa	Known RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	MFAP3	P55082	362 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	NAALADL2	Q58DX5	795 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	ARHGAP27	Q6ZUM4	889 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	AMIGO2	Q86SJ2	522 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	SMYD1	Q8NB12	490 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	PIGB	Q92521	554 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	ADNP	Q9H2P0	1102 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	TUBGCP4	Q9UGJ1	667 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	RABL2B	Q9UNT1	228 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	ITM2B	Q9Y287	266 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	HTR3E	A5X5Y0	456 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	CYP26A1	O43174	497 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	BCL10	O95999	233 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	GCLM	P48507	274 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	GSTO1	P78417	241 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	MRPS22	P82650	360 aa	Known RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	USH1G	Q495M9	461 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	FRMD5	Q7Z6J6	570 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	RBM15B	Q8NDT2	890 aa	Known RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	SLC5A5	Q92911	643 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	BORCS5	Q969J3	196 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	INTS2	Q9H0H0	1204 aa	Known RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	LIN28A	Q9H9Z2	209 aa	Known RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	MYRF	Q9Y2G1	1151 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	FADS3	Q9Y5Q0	445 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	TPST1	O60507	370 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	JAK1	P23458	1154 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	PON1	P27169	355 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	IL6ST	P40189	918 aa	Predicted RBP	11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	GYG1	P46976	350 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	OXCT1	P55809	520 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	PASD1	Q8IV76	773 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	SCYL1	Q96KG9	808 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	PIGS	Q96S52	555 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	SNX13	Q9Y5W8	968 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	TNS3	Q68CZ2	1445 aa		11.86	□□□□□ -0.51
SPIN3-231	ENST00000639895	TLR2	O60603	784 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	TDP2	O95551	362 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	CCNG1	P51959	295 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	NPEPPS	P55786	919 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	DAB2	P98082	770 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	CHRND	Q07001	517 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	NEDD8	Q15843	81 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	SYDE2	Q5VT97	1194 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	USP17L2	Q6R6M4	530 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	VSTM1	Q6UX27	236 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	DACH2	Q96NX9	599 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	WRNIP1	Q96S55	665 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	SETDB2	Q96T68	719 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	NMUR2	Q9GZQ4	415 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	ARMC7	Q9H6L4	198 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	NRDE2	Q9H7Z3	1164 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	PARVG	Q9HBI0	331 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	TMEM260	Q9NX78	707 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	PCDHA6	Q9UN73	950 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	EXOC7	Q9UPT5	735 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	PCDHA8	Q9Y5H6	950 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	ABCB11	O95342	1321 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	MXI1	P50539	228 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	CASP5	P51878	434 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	IL1RL1	Q01638	556 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	RPS6KA2	Q15349	733 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	CARTPT	Q16568	116 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	CCDC14	Q49A88	953 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	HGSNAT	Q68CP4	663 aa		11.85	□□□□□ -0.51
SPIN3-231	ENST00000639895	PRUNE1	Q86TP1	453 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms