RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ZNF785A8K8V0 405 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 PPP6CO00743 305 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 ARIH2O95376 493 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 TUBB4AP04350 444 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 HOXB6P17509 224 aaKnown RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 CD6P30203 668 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 ALDH9A1P49189 494 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 PSMC1P62191 440 aaKnown RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 KIF23Q02241 960 aaPredicted RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 SNAPC2Q13487 334 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 KLF9Q13886 244 aaPredicted RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 ETFDHQ16134 617 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 KHDC1Q4VXA5 237 aaKnown RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 RBM20Q5T481 1227 aaKnown RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 SLC4A10Q6U841 1118 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 SLC29A4Q7RTT9 530 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 WDR53Q7Z5U6 358 aaPredicted RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 DENND1AQ8TEH3 1009 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 ZBTB9Q96C00 473 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 REPS1Q96D71 796 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 VRK1Q99986 396 aaPredicted RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 FAM126AQ9BYI3 521 aaPredicted RBP4.63□□□□□ -1.67
CCDC7-211ENST00000638889 SMOC2Q9H3U7 446 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 DKK3Q9UBP4 350 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 POLHQ9Y253 713 aa4.63□□□□□ -1.67
CCDC7-211ENST00000638889 MYO1FO00160 1098 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 PCDHGA12O60330 932 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 RARBP10826 455 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 JUPP14923 745 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 SMARCA1P28370 1054 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 ZNF135P52742 658 aaPredicted RBP4.62□□□□□ -1.67
CCDC7-211ENST00000638889 KIF22Q14807 665 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 SYDE2Q5VT97 1194 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 ZNF66Q6ZN08 573 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 YTHDF3Q7Z739 585 aaKnown RBP4.62□□□□□ -1.67
CCDC7-211ENST00000638889 DTX2Q86UW9 622 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 KLHDC4Q8TBB5 520 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 DDX17Q92841 729 aaKnown RBP4.62□□□□□ -1.67
CCDC7-211ENST00000638889 ZNF48Q96MX3 618 aaPredicted RBP4.62□□□□□ -1.67
CCDC7-211ENST00000638889 SH3BP4Q9P0V3 963 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 TBC1D30Q9Y2I9 924 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 PCDHGA9Q9Y5G4 932 aaKnown RBP4.62□□□□□ -1.67
CCDC7-211ENST00000638889 PCDHGA8Q9Y5G5 932 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 PCDHGA7Q9Y5G6 932 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 PCDHGA6Q9Y5G7 932 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 PCDHGA3Q9Y5H0 932 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 RAD54BQ9Y620 910 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 ZNF521Q96K83 1311 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 CACNA1IQ9P0X4 2223 aa4.62□□□□□ -1.67
CCDC7-211ENST00000638889 FNDC1Q4ZHG4 1894 aaPredicted RBP4.62□□□□□ -1.67
CCDC7-211ENST00000638889 PRSS29PA6NIE9 313 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 TISP43B9A030 160 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 ZNF213O14771 459 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 XPOTO43592 962 aaKnown RBP4.61□□□□□ -1.67
CCDC7-211ENST00000638889 MT-CO1P00395 513 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 PIK3CGP48736 1102 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 ADKP55263 362 aaKnown RBP4.61□□□□□ -1.67
CCDC7-211ENST00000638889 DSC2Q02487 901 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 PRAMEF17Q5VTA0 474 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 SFRP4Q6FHJ7 346 aaPredicted RBP4.61□□□□□ -1.67
CCDC7-211ENST00000638889 SLC18B1Q6NT16 456 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 PPP1R32Q7Z5V6 425 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 DDX42Q86XP3 938 aaKnown RBP eCLIP4.61□□□□□ -1.67
CCDC7-211ENST00000638889 FANCBQ8NB91 859 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 TEKT5Q96M29 485 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 ZDHHC8Q9ULC8 765 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 SH2B3Q9UQQ2 575 aa4.61□□□□□ -1.67
CCDC7-211ENST00000638889 SHTN1A0MZ66 631 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 TLR5O60602 858 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 ONECUT2O95948 504 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 MPGP29372 298 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 PRDX5P30044 214 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 GCLCP48506 637 aaPredicted RBP4.6□□□□□ -1.67
CCDC7-211ENST00000638889 TOB1P50616 345 aaPredicted RBP4.6□□□□□ -1.67
CCDC7-211ENST00000638889 THEMIS2Q5TEJ8 643 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 FAM90A1Q86YD7 464 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 C3orf20Q8ND61 904 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 PUS7Q96PZ0 661 aaKnown RBP4.6□□□□□ -1.67
CCDC7-211ENST00000638889 TINAGL1Q9GZM7 467 aaPredicted RBP4.6□□□□□ -1.67
CCDC7-211ENST00000638889 WDCPQ9H6R7 721 aa4.6□□□□□ -1.67
CCDC7-211ENST00000638889 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 PRRT4C9JH25 899 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 H0YIZ8 118 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 QSOX1O00391 747 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 PPEF2O14830 753 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 SLC16A6O15403 523 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 SLC16A3O15427 465 aaKnown RBP4.59□□□□□ -1.67
CCDC7-211ENST00000638889 KIF20AO95235 890 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 MYBL2P10244 700 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 CYP2D6P10635 497 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 EEFSECP57772 596 aaKnown RBP4.59□□□□□ -1.67
CCDC7-211ENST00000638889 LAMB3Q13751 1172 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 UAP1L1Q3KQV9 507 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 CEP78Q5JTW2 689 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 VPS53Q5VIR6 699 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 ICE2Q659A1 982 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 TMEM79Q9BSE2 394 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 QTRT1Q9BXR0 403 aaKnown RBP4.59□□□□□ -1.67
CCDC7-211ENST00000638889 SERHLQ9NQF3 203 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 DLL3Q9NYJ7 618 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms