RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
TARDBP-229ENST00000638264 A0A1W2PPC1 479 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 IPO7O95373 1038 aaKnown RBP12.4□□□□□ -0.42
TARDBP-229ENST00000638264 LSM8O95777 96 aaKnown RBP12.4□□□□□ -0.42
TARDBP-229ENST00000638264 LINC00271P0C7V0 271 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 TSPY1Q01534 308 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 CDR2Q01850 454 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 ARID5AQ03989 594 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 CNGA2Q16280 664 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 ARHGAP17Q68EM7 881 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 KIAA1841Q6NSI8 718 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 SLC47A2Q86VL8 602 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 TMEM139Q8IV31 216 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
TARDBP-229ENST00000638264 TDHQ8IZJ6 230 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 TMEM130Q8N3G9 435 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 B3GALNT2Q8NCR0 500 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 HASPINQ8TF76 798 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 ZNF606Q8WXB4 792 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 PIK3R5Q8WYR1 880 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 ELMO3Q96BJ8 720 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
TARDBP-229ENST00000638264 AGPAT1Q99943 283 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 GPR62Q9BZJ7 368 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 ZNF518BQ9C0D4 1074 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 ELOVL4Q9GZR5 314 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 NHEJ1Q9H9Q4 299 aaPredicted RBP12.4□□□□□ -0.42
TARDBP-229ENST00000638264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
TARDBP-229ENST00000638264 CHST7Q9NS84 486 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 ARHGAP20Q9P2F6 1191 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 NOCTQ9UK39 431 aaKnown RBP12.4□□□□□ -0.42
TARDBP-229ENST00000638264 PCDHGC3Q9UN70 934 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 BACE2Q9Y5Z0 518 aa12.4□□□□□ -0.42
TARDBP-229ENST00000638264 LINC01553A4QN01 128 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 NT5C1B-RDH14C9J2C7 533 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 RBAK-RBAKDNI3L0D1 243 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 THAP12O43422 761 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 AKR1B10O60218 316 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 FGF18O76093 207 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 GZMAP12544 262 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 SKILP12757 684 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 CD19P15391 556 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 PTPN1P18031 435 aaKnown RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 TNFAIP3P21580 790 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 TKTP29401 623 aaKnown RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 DSG1Q02413 1049 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 NFE2Q16621 373 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 ZNF394Q53GI3 561 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 PDE12Q6L8Q7 609 aaKnown RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 FAM171BQ6P995 826 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 LCLAT1Q6UWP7 414 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 DDX1Q92499 740 aaKnown RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 TGS1Q96RS0 853 aaKnown RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 CHP1Q99653 195 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 SYT15Q9BQS2 421 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 SYT11Q9BT88 431 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 C11orf84Q9BUA3 381 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-229ENST00000638264 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 MAFFQ9ULX9 164 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
TARDBP-229ENST00000638264 ATP8B3O60423 1300 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 EIF3CLB5ME19 914 aaKnown RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 F8W810 466 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 I3L4J1 428 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 LCA5LO95447 670 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 C1RP00736 705 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 URODP06132 367 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 PDGFRBP09619 1106 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 SETSIPP0DME0 302 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 LMO2P25791 158 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 CTNNB1P35222 781 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 DEKP35659 375 aaKnown RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 EIF4A3P38919 411 aaKnown RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 GLUD2P49448 558 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 SLC8A3P57103 927 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 SNX16P57768 344 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 ERVK-21P61565 698 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 KRT83P78385 493 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 CCZ1BP86790 482 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 GOLGA8FQ08AF8 430 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 GOLGA8DPQ0D2H9 430 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 SPA17Q15506 151 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 SLC18A3Q16572 532 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 ASTE1Q2TB18 679 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 CTXN3Q4LDR2 81 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 ZNF571Q7Z3V5 609 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-229ENST00000638264 ACOT1Q86TX2 421 aa12.38□□□□□ -0.43
TARDBP-229ENST00000638264 NOP9Q86U38 636 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms