RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 RNF180Q86T96 592 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 ARRDC4Q8NCT1 418 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 C3orf20Q8ND61 904 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 RAET1EQ8TD07 263 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 NT5C1AQ9BXI3 368 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 SLITRK6Q9H5Y7 841 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 CYTH4Q9UIA0 394 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 LCMT1Q9UIC8 334 aa12.99□□□□□ -0.33
CACNA1D-228ENST00000638120 GOLGA6L10A0A0M3HER8 536 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 TMEM191CA6NGB0 347 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 MAP2K7O14733 419 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 SART1O43290 800 aaKnown RBP12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 CABYRO75952 493 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 GLI1P08151 1106 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 PYGMP11217 842 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 PNPLA4P41247 253 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 TAP1Q03518 808 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 SOX4Q06945 474 aaPredicted RBP12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 PTGISQ16647 500 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 FBXO47Q5MNV8 452 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 AADACL2Q6P093 401 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 HEXIM2Q96MH2 286 aaKnown RBP12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 DDX47Q9H0S4 455 aaKnown RBP12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 GDF3Q9NR23 364 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 CHST12Q9NRB3 414 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 FAM105AQ9NUU6 356 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 RNF19AQ9NV58 838 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 OGFRQ9NZT2 677 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 IP6K2Q9UHH9 426 aa12.98□□□□□ -0.33
CACNA1D-228ENST00000638120 M0QYV0 167 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 PTGESO14684 152 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 GPR182O15218 404 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 GJB6O95452 261 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 THPOP40225 353 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 ACLYP53396 1101 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 NFX1Q12986 1120 aaKnown RBP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 PTK7Q13308 1070 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 ITGA7Q13683 1181 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 STILQ15468 1287 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 CYP4A22Q5TCH4 519 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 HDXQ7Z353 690 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 GSPT2Q8IYD1 628 aaKnown RBP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 MRPL45Q9BRJ2 306 aaKnown RBP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 PLVAPQ9BX97 442 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 ERVK-5Q9HDB9 667 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 FRMPD3Q5JV73 1810 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 PSTPIP1O43586 416 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 LRPAP1P30533 357 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 GPD2P43304 727 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 RPL7AP62424 266 aaKnown RBP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 ZNF252P-AS1Q0IIN9 211 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 SOWAHAQ2M3V2 549 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 LCLAT1Q6UWP7 414 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 UNC93AQ86WB7 457 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 IFT20Q8IY31 132 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 AENQ8WTP8 325 aaKnown RBP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 DDX27Q96GQ7 796 aaKnown RBP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 MCEEQ96PE7 176 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 PPP1R10Q96QC0 940 aaKnown RBP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 CPXM1Q96SM3 734 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 HINFPQ9BQA5 517 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 GOLGA2P5Q9HBQ8 144 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 GDAP2Q9NXN4 497 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 WDR35Q9P2L0 1181 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 NR2E1Q9Y466 385 aa12.97□□□□□ -0.33
CACNA1D-228ENST00000638120 ZSCAN5CA6NGD5 496 aaPredicted RBP12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 KPNA7A9QM74 516 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 BHMG1C9JSJ3 638 aaPredicted RBP12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 INHAP05111 366 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 GABRB2P47870 512 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 VEGFBP49765 207 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 TAF6P49848 677 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 GUCY2DQ02846 1103 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 PDCLQ13371 301 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 TRIM71Q2Q1W2 868 aaKnown RBP12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 SV2CQ496J9 727 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 DCUN1D2Q6PH85 259 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 MAATS1Q7Z4T9 603 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 ADAT2Q7Z6V5 191 aaKnown RBP12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 SLC13A5Q86YT5 568 aaPredicted RBP12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 C18orf8Q96DM3 657 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 EPB41L5Q9HCM4 733 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 TJP2Q9UDY2 1190 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 TSPAN16Q9UKR8 245 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 NME7Q9Y5B8 376 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 CENPFP49454 3210 aa12.96□□□□□ -0.33
CACNA1D-228ENST00000638120 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
CACNA1D-228ENST00000638120 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
CACNA1D-228ENST00000638120 SPTLC1O15269 473 aa12.95□□□□□ -0.34
CACNA1D-228ENST00000638120 PHF2O75151 1096 aa12.95□□□□□ -0.34
CACNA1D-228ENST00000638120 ERBB2P04626 1255 aa12.95□□□□□ -0.34
CACNA1D-228ENST00000638120 EPHB4P54760 987 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms