RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SMYD5Q6GMV2 418 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 UHMK1Q8TAS1 419 aaKnown RBP22.75■■□□□ 1.23
CLN6-224ENST00000638076 CXorf38Q8TB03 319 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 TLCD1Q96CP7 247 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 RBM41Q96IZ5 413 aaKnown RBP22.75■■□□□ 1.23
CLN6-224ENST00000638076 SCLT1Q96NL6 688 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 SLITRK1Q96PX8 696 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 EPN3Q9H201 632 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 LHX5Q9H2C1 402 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 ASB7Q9H672 318 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 MORF4L1Q9UBU8 362 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 CYTH4Q9UIA0 394 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 KRT1P04264 644 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 KRT10P13645 584 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 ADCY2Q08462 1091 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 PIGHQ14442 188 aaPredicted RBP22.75■■□□□ 1.23
CLN6-224ENST00000638076 RHBDF2Q6PJF5 856 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 GPR142Q7Z601 462 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 SRLQ86TD4 932 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 AAASQ9NRG9 546 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 TJP2Q9UDY2 1190 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 STRIP2Q9ULQ0 834 aa22.75■■□□□ 1.23
CLN6-224ENST00000638076 ZSWIM8A7E2V4 1837 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 TLDC2A0PJX2 215 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 UNCXA6NJT0 531 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 NDUFAB1O14561 156 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 PAEPP09466 180 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 ATF2P15336 505 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 SMPD1P17405 629 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 ADCY8P40145 1251 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 VPS41P49754 854 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 ITGA8P53708 1063 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 PTGISQ16647 500 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 LRRC38Q5VT99 294 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 MFSD7Q6UXD7 560 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 TWNKQ96RR1 684 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 HMGXB4Q9UGU5 601 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 NEU2Q9Y3R4 380 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 SMIM23A6NLE4 172 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 GOLGA8SH3BPF8 625 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 ATF7P17544 494 aaPredicted RBP22.74■■□□□ 1.23
CLN6-224ENST00000638076 GRIK4Q16099 956 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 TXNRD3NBQ6F5E7 133 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 ZNF365Q70YC5 407 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 ILDR2Q71H61 639 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 ANKRD23Q86SG2 305 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 SLC4A11Q8NBS3 891 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 FAXDC2Q96IV6 333 aa22.74■■□□□ 1.23
CLN6-224ENST00000638076 RRP15Q9Y3B9 282 aaKnown RBP22.74■■□□□ 1.23
CLN6-224ENST00000638076 TSPAN1O60635 241 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 POLR2BP30876 1174 aaKnown RBP22.73■■□□□ 1.23
CLN6-224ENST00000638076 CHKAP35790 457 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 TMEM132DQ14C87 1099 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 MARCH8Q5T0T0 291 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 MAML3Q96JK9 1138 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 SCN4AP35499 1836 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 ATICP31939 592 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 RFC1P35251 1148 aaPredicted RBP22.73■■□□□ 1.23
CLN6-224ENST00000638076 BYSLQ13895 437 aaKnown RBP22.73■■□□□ 1.23
CLN6-224ENST00000638076 DUSP28Q4G0W2 176 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 NIPA2Q8N8Q9 360 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 PGM2Q96G03 612 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 TRAIPQ9BWF2 469 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 ELOVL4Q9GZR5 314 aa22.73■■□□□ 1.23
CLN6-224ENST00000638076 CDC42EP4Q9H3Q1 356 aaKnown RBP22.73■■□□□ 1.23
CLN6-224ENST00000638076 CILPO75339 1184 aa22.72■■□□□ 1.23
CLN6-224ENST00000638076 MMP3P08254 477 aa22.72■■□□□ 1.23
CLN6-224ENST00000638076 KRT3P12035 628 aa22.72■■□□□ 1.23
CLN6-224ENST00000638076 SEC24CP53992 1094 aa22.72■■□□□ 1.23
CLN6-224ENST00000638076 PTPN11Q06124 597 aaPredicted RBP22.72■■□□□ 1.23
CLN6-224ENST00000638076 GRB14Q14449 540 aa22.72■■□□□ 1.23
CLN6-224ENST00000638076 TRMT10CQ7L0Y3 403 aaKnown RBP22.72■■□□□ 1.23
CLN6-224ENST00000638076 ACSF2Q96CM8 615 aaPredicted RBP22.72■■□□□ 1.23
CLN6-224ENST00000638076 TMEM176AQ96HP8 235 aa22.72■■□□□ 1.23
CLN6-224ENST00000638076 VRTNQ9H8Y1 702 aa22.72■■□□□ 1.23
CLN6-224ENST00000638076 AGAP1Q9UPQ3 857 aa22.72■■□□□ 1.23
CLN6-224ENST00000638076 EBAG9O00559 213 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 KYAT1Q16773 422 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 SPOCD1Q6ZMY3 1216 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 CCDC89Q8N998 374 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 OR6J1Q8NGC5 347 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 RAPGEF5Q92565 580 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 HPDLQ96IR7 371 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 ACAP3Q96P50 834 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 CPXM1Q96SM3 734 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 ANAPC5Q9UJX4 755 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 SIGLEC16A6NMB1 481 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 RGS16O15492 202 aaPredicted RBP22.71■■□□□ 1.23
CLN6-224ENST00000638076 TJP3O95049 919 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 PSMC1P62191 440 aaKnown RBP22.71■■□□□ 1.23
CLN6-224ENST00000638076 CAV1Q03135 178 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 C6orf118Q5T5N4 469 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 GSTA5Q7RTV2 222 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 KIAA0319LQ8IZA0 1049 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 JOSD2Q8TAC2 188 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 EPS8L3Q8TE67 593 aaKnown RBP22.71■■□□□ 1.23
CLN6-224ENST00000638076 ADPGKQ9BRR6 497 aa22.71■■□□□ 1.23
CLN6-224ENST00000638076 DDX23Q9BUQ8 820 aaKnown RBP22.71■■□□□ 1.23
CLN6-224ENST00000638076 PPANQ9NQ55 473 aaKnown RBP22.71■■□□□ 1.23
CLN6-224ENST00000638076 A0A1B0GUA9 196 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms