RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 POLR1DQ9Y2S0 133 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 DYRK3O43781 588 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 CASP8Q14790 479 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 SETD3Q86TU7 594 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 FBXO16Q8IX29 292 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 KLHL25Q9H0H3 589 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 SMARCAL1Q9NZC9 954 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 GRIN3BO60391 1043 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 KATNA1O75449 491 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 GLRBP48167 497 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 PRKCEQ02156 737 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 SV2CQ496J9 727 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 CNBD2Q96M20 576 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 UBP1Q9NZI7 540 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 RBP5P82980 135 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 EMC2Q15006 297 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 CSGALNACT1Q8TDX6 532 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 KIAA0556O60303 1618 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 E9PBE3 544 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 RGL2O15211 777 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 DET1Q7L5Y6 550 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 RHOT1Q8IXI2 618 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 CAAP1Q9H8G2 361 aa18.6■□□□□ 0.57
CACNA1A-227ENST00000636549 KDM5DQ9BY66 1539 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 hCG_1984214I3L0E3 225 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 CBX4O00257 560 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 RAD23BP54727 409 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 PFKFB3Q16875 520 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 FNDC3BQ53EP0 1204 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 ICE2Q659A1 982 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 HEATR4Q86WZ0 1026 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 ZNF713Q8N859 430 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 BTBD9Q96Q07 612 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 PODXLO00592 558 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 GABPB1Q06547 395 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 GSTA3Q16772 222 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 CEP55Q53EZ4 464 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 GJB7Q6PEY0 223 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 TRIM51Q9BSJ1 452 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 SOHLH2Q9NX45 425 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 INSRP06213 1382 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 NFIBO00712 420 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 HLA-DQA2P01906 255 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 TCF7P36402 384 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 ARF5P84085 180 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 C9orf131Q5VYM1 1079 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 SERAC1Q96JX3 654 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 SLITRK1Q96PX8 696 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 GOLPH3LQ9H4A5 285 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 WDCPQ9H6R7 721 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 GNG14A0A1W2PPG7 69 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 APOL2Q9BQE5 337 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 SENP6Q9GZR1 1112 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 MYOZ2Q9NPC6 264 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 IPPQ9Y573 584 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 CDC27P30260 824 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 GTF2H1P32780 548 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 GJD4Q96KN9 370 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 THUMPD3Q9BV44 507 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 ZNF304Q9HCX3 659 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 TUFT1Q9NNX1 390 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 CDYLQ9Y232 598 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
CACNA1A-227ENST00000636549 TCP11X1B4DZS4 312 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 KRT33AO76009 404 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 NFIXQ14938 502 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 ACOX1Q15067 660 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 MROH9Q5TGP6 573 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 FAM124AQ86V42 546 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 ABHD10Q9NUJ1 306 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 B3GAT3O94766 335 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 TRAF7Q6Q0C0 670 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 R3HCC1LQ7Z5L2 792 aaKnown RBP18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 AMACRQ9UHK6 382 aa18.58■□□□□ 0.57
CACNA1A-227ENST00000636549 M0QYT0 321 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 STARD7Q9NQZ5 370 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 CLASP2O75122 1294 aaKnown RBP18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 EIF2S1P05198 315 aaKnown RBP18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 MSH4O15457 936 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 UMPSP11172 480 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 MAP3K10Q02779 954 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 LAMC2Q13753 1193 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 CNGA3Q16281 694 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 DCP1BQ8IZD4 617 aaKnown RBP18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 FRMD6Q96NE9 622 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 CATSPERBQ9H7T0 1116 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 VPS28Q9UK41 221 aa18.58■□□□□ 0.56
CACNA1A-227ENST00000636549 APBA1Q02410 837 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 TPGS1Q6ZTW0 290 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 MED15Q96RN5 788 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 AGPAT1Q99943 283 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 PIH1D1Q9NWS0 290 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 ZNF70Q9UC06 446 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 TRIM17Q9Y577 477 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 URODP06132 367 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 DEFB132Q7Z7B7 95 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms