RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	RPL6	Q02878	288 aa	Known RBP	10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	BYSL	Q13895	437 aa	Known RBP	10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	FAM187B	Q17R55	369 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	PLEKHG6	Q3KR16	790 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	TAF1B	Q53T94	588 aa	Predicted RBP	10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	ITIH5	Q86UX2	942 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	TTC9B	Q8N6N2	239 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	HMGB4	Q8WW32	186 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	USP13	Q92995	863 aa	Predicted RBP	10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	DYDC2	Q96IM9	177 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	SUSD3	Q96L08	255 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	PNMA5	Q96PV4	448 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	KIF2C	Q99661	725 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	ZSWIM4	Q9H7M6	989 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	TOR4A	Q9NXH8	423 aa		10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	DDX25	Q9UHL0	483 aa	Known RBP	10.71	□□□□□ -0.69
SPTAN1-231	ENST00000636337	COL5A1	P20908	1838 aa	Predicted RBP	10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TSC2	P49815	1807 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337		K7EQS6	105 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SGSM2	O43147	1006 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	RRP8	O43159	456 aa	Known RBP	10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SLC37A4	O43826	429 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	EDN1	P05305	212 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	HLA-E	P13747	358 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	CHML	P26374	656 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ADD1	P35611	737 aa	Known RBP	10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ZNF33A	Q06730	810 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	EPHA7	Q15375	998 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	DCAF4L1	Q3SXM0	396 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	CDCA2	Q69YH5	1023 aa	Predicted RBP	10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	PPP4R3A	Q6IN85	833 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	CENPP	Q6IPU0	288 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ZBTB8OS	Q8IWT0	167 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TPH2	Q8IWU9	490 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	PGBD3	Q8N328	593 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	MAB21L3	Q8N8X9	362 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ATAD1	Q8NBU5	361 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TTC16	Q8NEE8	873 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	CCDC148	Q8NFR7	591 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TCEANC2	Q96MN5	208 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	CCDC43	Q96MW1	224 aa	Known RBP	10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	LPIN3	Q9BQK8	851 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	PRDM16	Q9HAZ2	1276 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	IL21	Q9HBE4	155 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	GPRC5C	Q9NQ84	441 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TDP1	Q9NUW8	608 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SLC38A7	Q9NVC3	462 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	VPS54	Q9P1Q0	977 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	PCDHB8	Q9UN66	801 aa		10.7	□□□□□ -0.7
SPTAN1-231	ENST00000636337	KLF18	A0A0U1RQI7	1052 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337		B8ZZF3	427 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ERVH48-1	M5A8F1	160 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TLX3	O43711	291 aa	Predicted RBP	10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SLC28A2	O43868	658 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	DKK1	O94907	266 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	MARCKS	P29966	332 aa	Predicted RBP	10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	NUCB1	Q02818	461 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	YWHAH	Q04917	246 aa	Predicted RBP	10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	GPR17	Q13304	367 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	NCAPH2	Q6IBW4	605 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	MAEA	Q7L5Y9	396 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ALLC	Q8N6M5	410 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ATP2A3	Q93084	1043 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ZMAT2	Q96NC0	199 aa	Known RBP	10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	KIF9	Q9HAQ2	790 aa		10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	DUS2	Q9NX74	493 aa	Known RBP	10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.69	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SPTAN1	Q13813	2472 aa	Known RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	DOPEY2	Q9Y3R5	2298 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337		A0A1W2PQD8	194 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TCRBV21S2A2	A0A5A6	115 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	MTMR11	A4FU01	709 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SGK1	O00141	431 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	PLK4	O00444	970 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	ACKR2	O00590	384 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SLC27A2	O14975	620 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	OAZ2	O95190	189 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	KLF8	O95600	359 aa	Predicted RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	GSPT1	P15170	499 aa	Known RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	NMT1	P30419	496 aa	Known RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	RPL9	P32969	192 aa	Known RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	YARS	P54577	528 aa	Known RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	CXADR	P78310	365 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SEMG2	Q02383	582 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	GRIK2	Q13002	908 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	MTF1	Q14872	753 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	VEPH1	Q14D04	833 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	CCDC157	Q569K6	752 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	MOXD1	Q6UVY6	613 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SLC36A4	Q6YBV0	504 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	FMNL3	Q8IVF7	1028 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SMC5	Q8IY18	1101 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	TXNDC5	Q8NBS9	432 aa	Known RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	C18orf25	Q96B23	403 aa	Predicted RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	NXPE2	Q96DL1	559 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	HSPA12B	Q96MM6	686 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SEPT5	Q99719	369 aa	Predicted RBP	10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	C22orf23	Q9BZE7	217 aa		10.68	□□□□□ -0.7
SPTAN1-231	ENST00000636337	SEMA4C	Q9C0C4	833 aa		10.68	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms