RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	DOCK5	Q9H7D0	1870 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ZNF236	Q9UL36	1845 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	MTA2	O94776	668 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	GJB1	P08034	283 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	HOXD10	P28358	340 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PCK1	P35558	622 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	FLT3	P36888	993 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ZNF484	Q5JVG2	852 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	C6orf118	Q5T5N4	469 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	IER5	Q5VY09	327 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	EFCAB12	Q6NXP0	572 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	IRGC	Q6NXR0	463 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	GJB7	Q6PEY0	223 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ENDOV	Q8N8Q3	282 aa	Known RBP	11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	LMO3	Q8TAP4	145 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	IFT43	Q96FT9	208 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SELENOS	Q9BQE4	189 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PARP2	Q9UGN5	583 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	RPL26L1	Q9UNX3	145 aa	Known RBP	11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ARL2BP	Q9Y2Y0	163 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102		Q9Y3F1	56 aa		11.32	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	MYADML2	A6NDP7	307 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	LRRIQ4	A6NIV6	560 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ANKRD63	C9JTQ0	380 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	DDX3Y	O15523	660 aa	Known RBP	11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	DAPK3	O43293	454 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ADCY3	O60266	1144 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	FKTN	O75072	461 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	DUSP11	O75319	330 aa	Known RBP	11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ATP5H	O75947	161 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	C22orf31	O95567	290 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	MYL3	P08590	195 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SP100	P23497	879 aa	Predicted RBP	11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CCND3	P30281	292 aa	Predicted RBP	11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	RANBP1	P43487	201 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CLCN3	P51790	818 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	RNASE9	P60153	205 aa	Known RBP	11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	GPC5	P78333	572 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	TAS1R3	Q7RTX0	852 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	STK32A	Q8WU08	396 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ZNF668	Q96K58	619 aa	Predicted RBP	11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PRMT1	Q99873	361 aa	Known RBP	11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SYT15	Q9BQS2	421 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SETD4	Q9NVD3	440 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CTTNBP2NL	Q9P2B4	639 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	MCM3AP	O60318	1980 aa		11.31	□□□□□ -0.6
ARHGEF9-223	ENST00000636102		A8MUI8	341 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PODXL	O00592	558 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PGK1	P00558	417 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SRGAP2C	P0DJJ0	459 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PRKAR2A	P13861	404 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	NAMPT	P43490	491 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CPT1A	P50416	773 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PEX5	P50542	639 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	POU5F1	Q01860	360 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	LAMTOR4	Q0VGL1	99 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CAPS	Q13938	189 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	FSCN1	Q16658	493 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	EPC2	Q52LR7	807 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	MARCH8	Q5T0T0	291 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	HHAT	Q5VTY9	493 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	TRIM68	Q6AZZ1	485 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PHLDB3	Q6NSJ2	640 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	EXOC8	Q8IYI6	725 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	OLIG1	Q8TAK6	271 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	DEPTOR	Q8TB45	409 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	FMO2	Q99518	471 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	AP1M1	Q9BXS5	423 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	FAM192A	Q9GZU8	254 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	DDX47	Q9H0S4	455 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	WNT8A	Q9H1J5	351 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PABPC3	Q9H361	631 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PCIF1	Q9H4Z3	704 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ARHGAP28	Q9P2N2	729 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	STK38L	Q9Y2H1	464 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	RGS16	O15492	202 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SEPT4	O43236	478 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CREB3	O43889	395 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	FGG	P02679	453 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	C6orf222	P0C671	652 aa	Predicted RBP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PYGB	P11216	843 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CHRNA3	P32297	505 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	GTF2H1	P32780	548 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	GRIK4	Q16099	956 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	TNFAIP8L3	Q5GJ75	292 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	GNAS	Q5JWF2	1037 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	OR52E8	Q6IFG1	317 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	TMEM154	Q6P9G4	183 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	TAOK1	Q7L7X3	1001 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	RHPN2	Q8IUC4	686 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	MAP4K3	Q8IVH8	894 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	HOMEZ	Q8IX15	550 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	AGGF1	Q8N302	714 aa	eCLIP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	RDH13	Q8NBN7	331 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	RAET1E	Q8TD07	263 aa		11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	PSPC1	Q8WXF1	523 aa	Known RBP	11.3	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CBWD1	Q9BRT8	395 aa		11.3	□□□□□ -0.6

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