RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 PPP6R2O75170 966 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 PRPF6O94906 941 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 ITGB3P05106 788 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 HAPLN1P10915 354 aaPredicted RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 TIE1P35590 1138 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 TUFMP49411 452 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 CDR1P51861 262 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 MLLT6P55198 1093 aaPredicted RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 TFAMQ00059 246 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 SMARCB1Q12824 385 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 ALCAMQ13740 583 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 SV2CQ496J9 727 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 CNNM4Q6P4Q7 775 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 ZC3H14Q6PJT7 736 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 MAMSTRQ6ZN01 415 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 EPM2AIP1Q7L775 607 aaPredicted RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 LIMS2Q7Z4I7 341 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 TMEM150AQ86TG1 271 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 METTL23Q86XA0 190 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 GPIHBP1Q8IV16 184 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 ARID3BQ8IVW6 561 aaPredicted RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 THEM5Q8N1Q8 247 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 SUMF1Q8NBK3 374 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 C2orf15Q8WU43 125 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 HPS3Q969F9 1004 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 SNX21Q969T3 373 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 E2F7Q96AV8 911 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 FAM84AQ96KN4 292 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 SEPT5Q99719 369 aaPredicted RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 LPIN3Q9BQK8 851 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 TNMDQ9H2S6 317 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 SLITRK6Q9H5Y7 841 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 TMEM206Q9H813 350 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 PDE11AQ9HCR9 933 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 PRMT8Q9NR22 394 aaPredicted RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 TMLHEQ9NVH6 421 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 RBAKQ9NYW8 714 aaPredicted RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 TFIP11Q9UBB9 837 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 SIX4Q9UIU6 781 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 L1RE1Q9UN81 338 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 MRPS17Q9Y2R5 130 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 PIAS3Q9Y6X2 628 aa7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 ZNF638Q14966 1978 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 KIF26AQ9ULI4 1882 aaPredicted RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 CNOT1A5YKK6 2376 aaKnown RBP7.89□□□□□ -1.15
CACNA1A-222ENST00000636022 CEP295Q9C0D2 2601 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 PTPRJQ12913 1337 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 GOLGA8IPA6NC78 632 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 GOLGA8JA6NMD2 632 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ZNF263O14978 683 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 CHADO15335 359 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 NCAM2O15394 837 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 LAMTOR5O43504 91 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 CUTAO60888 179 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 LILRB5O75023 590 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 PRAMEF12O95522 483 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 YEATS4O95619 227 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 FGF19O95750 216 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 LDHAP00338 332 aaKnown RBP7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 CHRNB1P11230 501 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 TDGF1P13385 188 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 HMGA1P17096 107 aaKnown RBP7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 GABRR2P28476 465 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 POLR2BP30876 1174 aaKnown RBP7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 PNPLA4P41247 253 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 CSTF1Q05048 431 aaKnown RBP7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 MTAPQ13126 283 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 STK38Q15208 465 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 MGAT5BQ3V5L5 792 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 WDR44Q5JSH3 913 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 SHC4Q6S5L8 630 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ITIH5Q86UX2 942 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 CCDC65Q8IXS2 484 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 DCP1BQ8IZD4 617 aaKnown RBP7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 SYCP3Q8IZU3 236 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 PDCL2Q8N4E4 241 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 LRRC52Q8N7C0 313 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ZBTB44Q8NCP5 570 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ZNF507Q8TCN5 953 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 SPPL2BQ8TCT7 592 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 KCNG4Q8TDN1 519 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 CACTINQ8WUQ7 758 aaKnown RBP7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 FAM3CQ92520 227 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ZNF560Q96MR9 790 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 PKMYT1Q99640 499 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ACBD6Q9BR61 282 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 SLC46A2Q9BY10 475 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 TRIM9Q9C026 710 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 CHRDQ9H2X0 955 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ATXN3LQ9H3M9 355 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 CUEDC2Q9H467 287 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 PCIF1Q9H4Z3 704 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 TASP1Q9H6P5 420 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 GDAP2Q9NXN4 497 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 OBP2AQ9NY56 170 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ITGA11Q9UKX5 1188 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 AGAP1Q9UPQ3 857 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 PCDHGA2Q9Y5H1 932 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 GREB1Q4ZG55 1949 aa7.88□□□□□ -1.15
CACNA1A-222ENST00000636022 ACACBO00763 2458 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms