RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	SP110	Q9HB58	689 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	MRFAP1	Q9Y605	127 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	KCNN4	O15554	427 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	IRF1	P10914	325 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	TPI1	P60174	286 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	POU5F1B	Q06416	359 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	CUL2	Q13617	745 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	AP1AR	Q63HQ0	302 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	RBM23	Q86U06	439 aa	Known RBP	15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	VSIG10L	Q86VR7	867 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	RMDN1	Q96DB5	314 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	MAML3	Q96JK9	1138 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	RMDN2	Q96LZ7	410 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	CLTB	P09497	229 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	NCAM1	P13591	858 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	ITGB5	P18084	799 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	TAF6	P49848	677 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	SESN3	P58005	492 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	DCAF4L1	Q3SXM0	396 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	NOL9	Q5SY16	702 aa	Known RBP	15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	FBXW10	Q5XX13	1052 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	NOA1	Q8NC60	698 aa	Known RBP	15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	COG1	Q8WTW3	980 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	SLC13A1	Q9BZW2	595 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	SNTG2	Q9NY99	539 aa		15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	PARP4	Q9UKK3	1724 aa	Known RBP	15.04	■□□□□ -0
NEDD4L-238	ENST00000635997	TADA3	O75528	432 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	LGALS2	P05162	132 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	PCK1	P35558	622 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	GGCX	P38435	758 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	ROR1	Q01973	937 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	LRRC14	Q15048	493 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	GOLGA7B	Q2TAP0	167 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	TMTC4	Q5T4D3	741 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	GML	Q99445	158 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	RAB6B	Q9NRW1	208 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	BFAR	Q9NZS9	450 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	KANSL3	Q9P2N6	904 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	RAB23	Q9ULC3	237 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	TRPV2	Q9Y5S1	764 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CST8	O60676	142 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	UBA1	P22314	1058 aa	Known RBP	15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CHRNA3	P32297	505 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	DEUP1	Q05D60	604 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	FOXD4	Q12950	439 aa	Predicted RBP	15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	KYAT1	Q16773	422 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CCDC157	Q569K6	752 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	MPZL3	Q6UWV2	235 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	EMC1	Q8N766	993 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	REPS2	Q8NFH8	660 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CYFIP2	Q96F07	1278 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	IFT43	Q96FT9	208 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	RBM12	Q9NTZ6	932 aa	Known RBP	15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	RIPK3	Q9Y572	518 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	ITIH6	Q6UXX5	1313 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	GOLGA8R	I6L899	631 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	BAG2	O95816	211 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CASP2	P42575	452 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CASP5	P51878	434 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CDH8	P55286	799 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	MAGOH	P61326	146 aa	Known RBP	15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CFAP61	Q8NHU2	1237 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	CHMP6	Q96FZ7	201 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	VPS39	Q96JC1	886 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	OSBPL8	Q9BZF1	889 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	FBXL5	Q9UKA1	691 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	IL18RAP	O95256	599 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	PCSK1	P29120	753 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	MMEL1	Q495T6	779 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	DUSP28	Q4G0W2	176 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	SLC20A1	Q8WUM9	679 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	15.03	■□□□□ -0	3e-6	■■■■■ 35.3
NEDD4L-238	ENST00000635997	ZNF558	Q96NG5	402 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	PLEKHA5	Q9HAU0	1116 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	METTL5	Q9NRN9	209 aa	Known RBP	15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	BTBD7	Q9P203	1132 aa		15.03	■□□□□ -0
NEDD4L-238	ENST00000635997	LRRN4CL	Q8ND94	238 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	TLE6	Q9H808	572 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	YY1AP1	Q9H869	796 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	ALG13	Q9NP73	1137 aa	Known RBP	15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	RBPJL	Q9UBG7	517 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	UBQLN1	Q9UMX0	589 aa	Known RBP	15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	HES2	Q9Y543	173 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997		H3BRJ5	948 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	KRT37	O76014	449 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	SUN1	O94901	812 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	MYBL1	P10243	752 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	RBP3	P10745	1247 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	ACAT1	P24752	427 aa	Known RBP	15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	HSD17B4	P51659	736 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	ELAVL2	Q12926	359 aa	Known RBP	15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	SDE2	Q6IQ49	451 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	PDGFC	Q9NRA1	345 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	UVRAG	Q9P2Y5	699 aa		15.02	■□□□□ -0
NEDD4L-238	ENST00000635997	GLI3	P10071	1580 aa		15.02	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RALA	P11233	206 aa		15.02	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CYP2C18	P33260	490 aa		15.02	□□□□□ -0.01
NEDD4L-238	ENST00000635997	CHRDL2	Q6WN34	429 aa		15.02	□□□□□ -0.01
NEDD4L-238	ENST00000635997	RIN2	Q8WYP3	895 aa	Predicted RBP	15.02	□□□□□ -0.01
NEDD4L-238	ENST00000635997	OSGEP	Q9NPF4	335 aa		15.02	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms