RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 GTPBP10A4D1E9 387 aaKnown RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 TLL1O43897 1013 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 ARHGEF15O94989 841 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 FAM189BP81408 668 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 GTF2BQ00403 316 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 TRADDQ15628 312 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 SNCBQ16143 134 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 SLC27A1Q6PCB7 646 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 ZNF571Q7Z3V5 609 aaPredicted RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 TMC3Q7Z5M5 1100 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 ZNF598Q86UK7 904 aaKnown RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 SMG8Q8ND04 991 aaKnown RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 UBLCP1Q8WVY7 318 aaPredicted RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 TATDN2Q93075 761 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 SGSM3Q96HU1 749 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 ACO2Q99798 780 aaKnown RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 TRAIPQ9BWF2 469 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 MRPL4Q9BYD3 311 aaKnown RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 CENPHQ9H3R5 247 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 NXF3Q9H4D5 531 aaKnown RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 ARMCX3Q9UH62 379 aaPredicted RBP16.47■□□□□ 0.23
CLN8-209ENST00000635970 LRFN2Q9ULH4 789 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 PCDHB7Q9Y5E2 793 aa16.47■□□□□ 0.23
CLN8-209ENST00000635970 H0YCG3 227 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 H2AFZP0C0S5 128 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 DNAJB2P25686 324 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 ARID5AQ03989 594 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 XRCC4Q13426 336 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 EXOC3L4Q17RC7 722 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 ANKRD20A8PQ5CZ79 823 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 H2AFVQ71UI9 128 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 GPATCH11Q8N954 259 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 GIMAP7Q8NHV1 300 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 BICD1Q96G01 975 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 ZBTB45Q96K62 511 aaPredicted RBP16.46■□□□□ 0.23
CLN8-209ENST00000635970 YME1L1Q96TA2 773 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 STRA6Q9BX79 667 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 TRIM6Q9C030 488 aaPredicted RBP16.46■□□□□ 0.23
CLN8-209ENST00000635970 ST6GALNAC4Q9H4F1 302 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 RC3H2Q9HBD1 1191 aaKnown RBP16.46■□□□□ 0.23
CLN8-209ENST00000635970 RNF19AQ9NV58 838 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 TMEM161AQ9NX61 479 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 ANKFY1Q9P2R3 1169 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 DAAM1Q9Y4D1 1078 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 IPPQ9Y573 584 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 TRIP11Q15643 1979 aa16.46■□□□□ 0.23
CLN8-209ENST00000635970 TISP43B9A030 160 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 CALUO43852 315 aaPredicted RBP16.46■□□□□ 0.22
CLN8-209ENST00000635970 PPFIA2O75334 1257 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 DGKIO75912 1065 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 DNAJC8O75937 253 aaPredicted RBP16.46■□□□□ 0.22
CLN8-209ENST00000635970 CA3P07451 260 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 SLC8A1P32418 973 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 GBP1P32455 592 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.22
CLN8-209ENST00000635970 SMAD3P84022 425 aaKnown RBP16.46■□□□□ 0.22
CLN8-209ENST00000635970 BYSLQ13895 437 aaKnown RBP16.46■□□□□ 0.22
CLN8-209ENST00000635970 PAN2Q504Q3 1202 aaKnown RBP16.46■□□□□ 0.22
CLN8-209ENST00000635970 DPY19L2P1Q6NXN4 242 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 SPRED2Q7Z698 418 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 MAP4K3Q8IVH8 894 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 PARP9Q8IXQ6 854 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 HES6Q96HZ4 224 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 APOL6Q9BWW8 343 aa16.46■□□□□ 0.22
CLN8-209ENST00000635970 TDRD15B5MCY1 1934 aaKnown RBP16.45■□□□□ 0.22
CLN8-209ENST00000635970 PDXKO00764 312 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 ABLIM1O14639 778 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 HNRNPDLO14979 420 aaKnown RBP16.45■□□□□ 0.22
CLN8-209ENST00000635970 SLC16A3O15427 465 aaKnown RBP16.45■□□□□ 0.22
CLN8-209ENST00000635970 STAG3L1P0CL83 205 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 FERP16591 822 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 NR2F2P24468 414 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 RPL13P26373 211 aaKnown RBP16.45■□□□□ 0.22
CLN8-209ENST00000635970 RAB27AP51159 221 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 DRG2P55039 364 aaKnown RBP16.45■□□□□ 0.22
CLN8-209ENST00000635970 HTRA4P83105 476 aaPredicted RBP16.45■□□□□ 0.22
CLN8-209ENST00000635970 ZNF568Q3ZCX4 644 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 CLLU1OSQ5K130 101 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 ZBTB33Q86T24 672 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 FUKQ8N0W3 1084 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 SLC17A8Q8NDX2 589 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 RAPGEF5Q92565 580 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 KCNN1Q92952 543 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 TLCD1Q96CP7 247 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 RAD9AQ99638 391 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 NKX2-4Q9H2Z4 354 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 ELAC1Q9H777 363 aaKnown RBP16.45■□□□□ 0.22
CLN8-209ENST00000635970 AMFRQ9UKV5 643 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 TNFSF13BQ9Y275 285 aa16.45■□□□□ 0.22
CLN8-209ENST00000635970 F8VZ95 297 aa16.44■□□□□ 0.22
CLN8-209ENST00000635970 GSTA1P08263 222 aa16.44■□□□□ 0.22
CLN8-209ENST00000635970 NUDT17P0C025 328 aa16.44■□□□□ 0.22
CLN8-209ENST00000635970 HARSP12081 509 aaKnown RBP16.44■□□□□ 0.22
CLN8-209ENST00000635970 SLC39A4Q6P5W5 647 aa16.44■□□□□ 0.22
CLN8-209ENST00000635970 CYB5D1Q6P9G0 228 aa16.44■□□□□ 0.22
CLN8-209ENST00000635970 CPLX4Q7Z7G2 160 aa16.44■□□□□ 0.22
CLN8-209ENST00000635970 NT5DC3Q86UY8 548 aa16.44■□□□□ 0.22
CLN8-209ENST00000635970 ANKS4BQ8N8V4 417 aa16.44■□□□□ 0.22
CLN8-209ENST00000635970 CEP120Q8N960 986 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms