RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ADSSP30520 456 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 IRX5P78411 483 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 GSPT2Q8IYD1 628 aaKnown RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PRELID2Q8N945 189 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 PPTC7Q8NI37 304 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 TRIM51Q9BSJ1 452 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 WRAP73Q9P2S5 460 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-210ENST00000635776 SALL4Q9UJQ4 1053 aa4.8□□□□□ -1.64
SCN1A-210ENST00000635776 CNTNAP2Q9UHC6 1331 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CCL15-CCL14A0A0B4J2E2 113 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 DNALI1O14645 258 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 TCEA3O75764 348 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ZBED1O96006 694 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 F9P00740 461 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 UNGP13051 313 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 PEX5P50542 639 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 AIF1P55008 147 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 BCAR1P56945 870 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CCL15Q16663 113 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 DARS2Q6PI48 645 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 C15orf39Q6ZRI6 1047 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 EEPD1Q7L9B9 569 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 OR6J1Q8NGC5 347 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 PPP1R14CQ8TAE6 165 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CPA5Q8WXQ8 436 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 TATDN2Q93075 761 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 HPDLQ96IR7 371 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CCT8L2Q96SF2 557 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SYT11Q9BT88 431 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 VRTNQ9H8Y1 702 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 TXLNGQ9NUQ3 528 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 TMEM191CA6NGB0 347 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ATP5BP06576 529 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SERPINB6P35237 376 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 TAF6P49848 677 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 VCPP55072 806 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ROR1Q01973 937 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF844Q08AG5 666 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ASPHQ12797 758 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 GPR162Q16538 588 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ADAT2Q7Z6V5 191 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SIX6OS1Q8N1H7 587 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 KIFC3Q9BVG8 833 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 XAB2Q9HCS7 855 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 EHD2Q9NZN4 543 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 APOC4-APOC2K7ER74 178 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 APOC2P02655 101 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 BRAFP15056 766 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 KPNA2P52292 529 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 HIF1AQ16665 826 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 P3H1Q32P28 736 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RELL1Q8IUW5 271 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 HDAC7Q8WUI4 952 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RNF25Q96BH1 459 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 KIF12Q96FN5 646 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 NEU2Q9Y3R4 380 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RIPK3Q9Y572 518 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 NRCAMQ92823 1304 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 GOLGA8QA0A0J9YX86 632 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 GOLGA8OA6NCC3 632 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 GOLGA8NF8WBI6 632 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 H3BRB1 525 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 H3BRJ5 948 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 STAG3L1P0CL83 205 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MX2P20592 715 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CDH5P33151 784 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RGS2P41220 211 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SHROOM1Q2M3G4 852 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 TDRD10Q5VZ19 366 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 PSTKQ8IV42 348 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 VPS52Q8N1B4 723 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF473Q8WTR7 871 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ATXN2LQ8WWM7 1075 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 NKD2Q969F2 451 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 HSFY1Q96LI6 401 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 TUT1Q9H6E5 874 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 EFCC1Q9HA90 598 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SAYSD1Q9NPB0 183 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 PSMC3IPQ9P2W1 217 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 Q9Y3F1 56 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SLURP2P0DP57 97 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RALAP11233 206 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 PDGFRAP16234 1089 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RAB27AP51159 221 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 NLRP11P59045 1033 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MAMLD1Q13495 774 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MAPRE1Q15691 268 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 FAM102AQ5T9C2 384 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 LRRC31Q6UY01 552 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 OR6B3Q8NGW1 331 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SOCS4Q8WXH5 440 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 OPTNQ96CV9 577 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ZWILCHQ9H900 591 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MROH7Q68CQ1 1323 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SMIM23A6NLE4 172 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CAPN9O14815 690 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RIPK2O43353 540 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CNTFP26441 200 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms