RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RNF112Q9ULX5 631 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ZBTB1Q9Y2K1 713 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 PCDHB9Q9Y5E1 797 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 MRFAP1Q9Y605 127 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 UTYO14607 1347 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 PTCH1Q13635 1447 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ZMYM4Q5VZL5 1548 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 RTN2O75298 545 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 PNPLA4P41247 253 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 MAPKAPK2P49137 400 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CAMK1Q14012 370 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 EFHC1Q5JVL4 640 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 GNASQ5JWF2 1037 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 LRRC8DQ7L1W4 858 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SLC25A41Q8N5S1 370 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SCAIQ8N9R8 606 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 UBE2Q2Q8WVN8 375 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 UBXN6Q9BZV1 441 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 BCL2L12Q9HB09 334 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 AVENQ9NQS1 362 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ADAM21Q9UKJ8 722 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 RRP15Q9Y3B9 282 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SNX9Q9Y5X1 595 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CYP2D7A0A087X1C5 515 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 C17orf102A2RUQ5 167 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 RGS5O15539 181 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 GNRH1P01148 92 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 PBLDP30039 288 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SERPINB1P30740 379 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 LSP1P33241 339 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SPRP35270 261 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ETFBP38117 255 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ATP12AP54707 1039 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 C1DQ13901 141 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 NKX1-1Q15270 411 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 KRT31Q15323 416 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CYP51A1Q16850 503 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 FAM83EQ2M2I3 478 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SGSM1Q2NKQ1 1148 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CCDC137Q6PK04 289 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SFR1Q86XK3 245 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 C19orf18Q8NEA5 215 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SERAC1Q96JX3 654 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CLCC1Q96S66 551 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 EPC1Q9H2F5 836 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 TUFT1Q9NNX1 390 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 MIEF1Q9NQG6 463 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 KLHL28Q9NXS3 571 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ZSWIM5Q9P217 1185 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CTNNAL1Q9UBT7 734 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 XPO7Q9UIA9 1087 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 GRID2IPA4D2P6 1211 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 KLHL18O94889 574 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SLC25A27O95847 323 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 MBL2P11226 248 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 NCAM1P13591 858 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ENO3P13929 434 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 IL2P60568 153 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 GPRC5AQ8NFJ5 357 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 EME1Q96AY2 570 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CYFIP2Q96F07 1278 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SENP7Q9BQF6 1050 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 EIF2AK1Q9BQI3 630 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 NT5C1AQ9BXI3 368 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ADGRE3Q9BY15 652 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 LMBRD1Q9NUN5 540 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 TBC1D23Q9NUY8 699 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF839A8K0R7 811 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 CYP2B6P20813 491 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 AKAP5P24588 427 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 MAGEA10P43363 369 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SCNN1BP51168 640 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 BTKQ06187 659 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 COX10Q12887 443 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SMAD1Q15797 465 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 TBC1D25Q3MII6 688 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 DCAF6Q58WW2 860 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 WLSQ5T9L3 541 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 GAS2L3Q86XJ1 694 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 WDR36Q8NI36 951 aaKnown RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 WNK4Q96J92 1243 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SNX24Q9Y343 169 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 A0A088AWK7 358 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 FAM187AA6NFU0 413 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ANXA9O76027 345 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 OR6A2O95222 327 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF10P21506 573 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SSTR3P32745 418 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 DRAP1Q14919 205 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 AGMOQ6ZNB7 445 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 OTOAQ7RTW8 1153 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SETD3Q86TU7 594 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 MCOLN3Q8TDD5 553 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 SSH3Q8TE77 659 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 USP33Q8TEY7 942 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 LPAR1Q92633 364 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCN1A-209ENST00000635750 GPN3Q9UHW5 284 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms