RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 TTC8Q8TAM2 541 aa13.6□□□□□ -0.23
PTPN11-206ENST00000635652 SPPL2BQ8TCT7 592 aa13.6□□□□□ -0.23
PTPN11-206ENST00000635652 C2orf15Q8WU43 125 aaKnown RBP13.6□□□□□ -0.23
PTPN11-206ENST00000635652 BORCS6Q96GS4 357 aa13.6□□□□□ -0.23
PTPN11-206ENST00000635652 ZSCAN16Q9H4T2 348 aaPredicted RBP13.6□□□□□ -0.23
PTPN11-206ENST00000635652 PCIF1Q9H4Z3 704 aa13.6□□□□□ -0.23
PTPN11-206ENST00000635652 OLFML3Q9NRN5 406 aa13.6□□□□□ -0.23
PTPN11-206ENST00000635652 ZSCAN32Q9NX65 697 aa13.6□□□□□ -0.23
PTPN11-206ENST00000635652 RBAKQ9NYW8 714 aaPredicted RBP13.6□□□□□ -0.23
PTPN11-206ENST00000635652 CACNA1AO00555 2505 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 NUP210Q8TEM1 1887 aaPredicted RBP13.59□□□□□ -0.23
PTPN11-206ENST00000635652 A0A087X0B3 334 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 ARNTLO00327 626 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 STX6O43752 255 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 PRPF6O94906 941 aaKnown RBP13.59□□□□□ -0.23
PTPN11-206ENST00000635652 KRT19P08727 400 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 ATF6P18850 670 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 GARTP22102 1010 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 CDC25CP30307 473 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 CYP4F8P98187 520 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 FOXK2Q01167 660 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 TSPY1Q01534 308 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 FCHO2Q0JRZ9 810 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 SMARCB1Q12824 385 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 ALCAMQ13740 583 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 PPP2R5DQ14738 602 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 BRSK2Q8IWQ3 736 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 CCDC65Q8IXS2 484 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 CSGALNACT2Q8N6G5 542 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 ZFYVE19Q96K21 471 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 MKNK1Q9BUB5 465 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 CHRDQ9H2X0 955 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 TASP1Q9H6P5 420 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 NCDNQ9UBB6 729 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 R3HCC1Q9Y3T6 440 aaKnown RBP13.59□□□□□ -0.23
PTPN11-206ENST00000635652 PCDHB5Q9Y5E4 795 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 COL4A2P08572 1712 aa13.59□□□□□ -0.23
PTPN11-206ENST00000635652 FRMD3A2A2Y4 597 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 EXTL3O43909 919 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 HUS1O60921 280 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 HAPLN1P10915 354 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 SOX9P48436 509 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 MLLT6P55198 1093 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 WNT7BP56706 349 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 BFSP1Q12934 665 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 ARHGAP29Q52LW3 1261 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 C1orf228Q6PIY5 440 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 C1orf127Q8N9H9 656 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 ZBTB44Q8NCP5 570 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 LRRC3BQ96PB8 259 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 CBWD1Q9BRT8 395 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 IER2Q9BTL4 223 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 PI4K2AQ9BTU6 479 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 FAM126AQ9BYI3 521 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 C8orf33Q9H7E9 229 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 PRMT8Q9NR22 394 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 DDX43Q9NXZ2 648 aaKnown RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 GTSE1Q9NYZ3 720 aa13.58□□□□□ -0.24
PTPN11-206ENST00000635652 TFIP11Q9UBB9 837 aaKnown RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 KIF26AQ9ULI4 1882 aaPredicted RBP13.58□□□□□ -0.24
PTPN11-206ENST00000635652 DENND4CQ5VZ89 1909 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
PTPN11-206ENST00000635652 PRAMEF12O95522 483 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 CHRNB1P11230 501 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 ACAT1P24752 427 aaKnown RBP13.57□□□□□ -0.24
PTPN11-206ENST00000635652 CXCL12P48061 93 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 CCR3P51677 355 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 NRLP54845 237 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 MYL7Q01449 175 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 LRRC32Q14392 662 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 NFE2Q16621 373 aaPredicted RBP13.57□□□□□ -0.24
PTPN11-206ENST00000635652 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 ERMP1Q7Z2K6 904 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 GPD1LQ8N335 351 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 PDCL2Q8N4E4 241 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 BPIFB1Q8TDL5 484 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 NELL1Q92832 810 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 SECISBP2LQ93073 1101 aaKnown RBP13.57□□□□□ -0.24
PTPN11-206ENST00000635652 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 FAM84AQ96KN4 292 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 SLC46A2Q9BY10 475 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 BACH2Q9BYV9 841 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 LRRC27Q9C0I9 530 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 SMG9Q9H0W8 520 aaKnown RBP13.57□□□□□ -0.24
PTPN11-206ENST00000635652 IL21Q9HBE4 155 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 PDE11AQ9HCR9 933 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 TMLHEQ9NVH6 421 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 THG1LQ9NWX6 298 aaKnown RBP13.57□□□□□ -0.24
PTPN11-206ENST00000635652 OBP2AQ9NY56 170 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 ITGA11Q9UKX5 1188 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 L1RE1Q9UN81 338 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 MAGED2Q9UNF1 606 aaPredicted RBP13.57□□□□□ -0.24
PTPN11-206ENST00000635652 SNX9Q9Y5X1 595 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 MORC2Q9Y6X9 1032 aaPredicted RBP13.57□□□□□ -0.24
PTPN11-206ENST00000635652 ATG2BQ96BY7 2078 aa13.57□□□□□ -0.24
PTPN11-206ENST00000635652 SPTBN2O15020 2390 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms