RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 HTR6P50406 440 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ANXA11P50995 505 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 GUCY2FP51841 1108 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 SESN3P58005 492 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 NXPH1P58417 271 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ANAPC15P60006 121 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 NANOS2P60321 138 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 RHDQ02161 417 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ITIH3Q06033 890 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ZNF844Q08AG5 666 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 DYRK1AQ13627 763 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 SEMA3AQ14563 771 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 STAT4Q14765 748 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 PDCD1Q15116 288 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 DHCR24Q15392 516 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 TBCCQ15814 346 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 PLAC9Q5JTB6 97 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 TOR2AQ5JU69 321 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 RNF219Q5W0B1 726 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 MIS18BP1Q6P0N0 1132 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 CEP85Q6P2H3 762 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 PGM2L1Q6PCE3 622 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 FAM180AQ6UWF9 173 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 PNMA8AQ86V59 439 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 RASSF3Q86WH2 238 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 DDX42Q86XP3 938 aaKnown RBP eCLIP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 SPATS2Q86XZ4 545 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 CMIPQ8IY22 773 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 KRT78Q8N1N4 520 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ZGPATQ8N5A5 531 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 PPM1NQ8N819 430 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ZCRB1Q8TBF4 217 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 COG1Q8WTW3 980 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 RFKQ969G6 155 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 REPS1Q96D71 796 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 MTMR8Q96EF0 704 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 PBKQ96KB5 322 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 TPSD1Q9BZJ3 242 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 TOPORSQ9NS56 1045 aaPredicted RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 C14orf119Q9NWQ9 140 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 DNAJC28Q9NX36 388 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 SLC5A4Q9NY91 659 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 FAM30AQ9NZY2 134 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 CTTNBP2NLQ9P2B4 639 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 KLHL13Q9P2N7 655 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 DNM3Q9UQ16 869 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ATP8A1Q9Y2Q0 1164 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 CFAP43Q8NDM7 1665 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 ITSN2Q9NZM3 1697 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 KIAA0556O60303 1618 aa1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 XIRP1Q702N8 1843 aaKnown RBP1.47□□□□□ -2.17
SMARCB1-209ENST00000635578 BCORL1Q5H9F3 1711 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CDC42BPAQ5VT25 1732 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 PREX1Q8TCU6 1659 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 hCG_2014768A0A024R1R8 64 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CYP2D7A0A087X1C5 515 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CCDC195A0A1B0GUA6 201 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CD8B2A6NJW9 211 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 ADAM10O14672 748 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 PRKD3O94806 890 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 HAUS5O94927 633 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 GAS8-AS1O95177 125 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 MT-CO1P00395 513 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 MTHFD2P13995 350 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 JUPP14923 745 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 NCLP19338 710 aaKnown RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CDK11BP21127 795 aaKnown RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 SLC6A4P31645 630 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 NPTX2P47972 431 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 KRTAP10-5P60370 271 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 SRSF2Q01130 221 aaKnown RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 PPP3CAQ08209 521 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 FAPQ12884 760 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 MTM1Q13496 603 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 DAZAP2Q15038 168 aaPredicted RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 TRIP6Q15654 476 aaKnown RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 ADRM1Q16186 407 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 FSCN1Q16658 493 aaKnown RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 MUM1L1Q5H9M0 696 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 UTP14CQ5TAP6 766 aaKnown RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CATSPERGQ6ZRH7 1159 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 LHFPL2Q6ZUX7 228 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 KRT26Q7Z3Y9 468 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 MRPL10Q7Z7H8 261 aaKnown RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CHSY1Q86X52 802 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 FAM177A1Q8N128 213 aaPredicted RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 GALNT16Q8N428 558 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CNTD1Q8N815 330 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CLRN3Q8NCR9 226 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 TSPEARQ8WU66 669 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 AUTS2Q8WXX7 1259 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 HOXB13Q92826 284 aaPredicted RBP1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 RAB24Q969Q5 203 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 ACAP3Q96P50 834 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 SLC2A13Q96QE2 648 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 CTAGE1Q96RT6 745 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 ORAI3Q9BRQ5 295 aa1.46□□□□□ -2.18
SMARCB1-209ENST00000635578 TMEM79Q9BSE2 394 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms