RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 LACTBP83111 547 aaPredicted RBP13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 SLMAPQ14BN4 828 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 RGMBQ6NW40 437 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 DCUN1D2Q6PH85 259 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 ERICH1Q86X53 443 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 ARFGAP2Q8N6H7 521 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 SNF8Q96H20 258 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 PWWP2AQ96N64 755 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 C16orf70Q9BSU1 422 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 AKT3Q9Y243 479 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 KRT1P04264 644 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 SLCO1A2P46721 670 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 ITGA8P53708 1063 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 RAD23BP54727 409 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 PTPN20Q4JDL3 420 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 ZNF667Q5HYK9 610 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 HOOK3Q86VS8 718 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 EPS8L3Q8TE67 593 aaKnown RBP13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 SLITRK1Q96PX8 696 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 BCO2Q9BYV7 579 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 TLL2Q9Y6L7 1015 aa13.17□□□□□ -0.3
UBASH3A-209ENST00000635325 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 GOLGA8SH3BPF8 625 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 MYO1CO00159 1063 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 TULP2O00295 520 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 GAS8O95995 478 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 MCF2P10911 925 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 ATF2P15336 505 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 ITIH2P19823 946 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 ADCY8P40145 1251 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 IFI35P80217 286 aaPredicted RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 CCNG2Q16589 344 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 FAM187BQ17R55 369 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 SLC10A6Q3KNW5 377 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 KAZNQ674X7 775 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 SMYD5Q6GMV2 418 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 MFSD7Q6UXD7 560 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 SYDE1Q6ZW31 735 aaPredicted RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 C3orf20Q8ND61 904 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 GRK7Q8WTQ7 553 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 PTPN18Q99952 460 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 ZNF518BQ9C0D4 1074 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 CDC42EP4Q9H3Q1 356 aaKnown RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 VTA1Q9NP79 307 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 MORF4L1Q9UBU8 362 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 TRIM66O15016 1216 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 SLC10A3P09131 477 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 ATF7P17544 494 aaPredicted RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 CCNA1P78396 465 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 MARCH8Q5T0T0 291 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 ZFYVE27Q5T4F4 411 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 MTHFD1LQ6UB35 978 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 NLRP14Q86W24 1093 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 RCOR2Q8IZ40 523 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 SLC4A11Q8NBS3 891 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 MDM1Q8TC05 714 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 PGM2Q96G03 612 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 SCLT1Q96NL6 688 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 FAM129AQ9BZQ8 928 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 ELOVL4Q9GZR5 314 aa13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 PPANQ9NQ55 473 aaKnown RBP13.16□□□□□ -0.3
UBASH3A-209ENST00000635325 E7EVH7 732 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 EBAG9O00559 213 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 MAGEB2O15479 319 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 ACSL3O95573 720 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 YY1P25490 414 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 BYSLQ13895 437 aaKnown RBP13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 GLIS1Q8NBF1 620 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 JOSD2Q8TAC2 188 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 MYCBPAPQ8TBZ2 947 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 EMID1Q96A84 441 aaPredicted RBP13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 CCT8L2Q96SF2 557 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 CPXM1Q96SM3 734 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 HOMER3Q9NSC5 361 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 DNPEPQ9ULA0 475 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 CEP83Q9Y592 693 aa13.15□□□□□ -0.3
UBASH3A-209ENST00000635325 PLXNA1Q9UIW2 1896 aa13.15□□□□□ -0.31
UBASH3A-209ENST00000635325 PLXNB2O15031 1838 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 H3BRB1 525 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 ADCY6O43306 1168 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 TSPAN1O60635 241 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 SMPD1P17405 629 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 KLRC2P26717 231 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 POLR2BP30876 1174 aaKnown RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 YWHAEP62258 255 aaKnown RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 LRRC38Q5VT99 294 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 SPOCD1Q6ZMY3 1216 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms