RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 RBM12Q9NTZ6 932 aaKnown RBP16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 TBC1D7Q9P0N9 293 aa16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 UBQLN1Q9UMX0 589 aaKnown RBP16.82■□□□□ 0.28
SNRNP48-203ENST00000634363 CACNA1AO00555 2505 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 CEP250Q9BV73 2442 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 CHURC1-FNTBB4DL54 471 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 DPYSL4O14531 572 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 XPOTO43592 962 aaKnown RBP16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 SOAT2O75908 522 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 TDGF1P13385 188 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 TGM1P22735 817 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 LRPAP1P30533 357 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 FNTBP49356 437 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 GTF2BQ00403 316 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 GPR17Q13304 367 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 ALCAMQ13740 583 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 SIM2Q14190 667 aaPredicted RBP16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 ZBTB6Q15916 424 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 ARMCX5Q6P1M9 558 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 MAMSTRQ6ZN01 415 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 ZNF720Q7Z2F6 126 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 DNAJB7Q7Z6W7 309 aaPredicted RBP16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 GRAMD1CQ8IYS0 662 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 BEST2Q8NFU1 509 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 FAM200AQ8TCP9 573 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 PAGE5Q96GU1 130 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 ZFYVE19Q96K21 471 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 CNTNAP3BQ96NU0 1288 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 IER2Q9BTL4 223 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 LRRC3Q9BY71 257 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 OXCT2Q9BYC2 517 aaPredicted RBP16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 CNTNAP3Q9BZ76 1288 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.81■□□□□ 0.28
SNRNP48-203ENST00000634363 OR6C75A6NL08 312 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 TULP1O00294 542 aaPredicted RBP16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 CHADO15335 359 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 MYL1P05976 194 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 CYP3A5P20815 502 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 DMWDQ09019 674 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 SRSF5Q13243 272 aaKnown RBP16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 CUL4BQ13620 913 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 GAS6Q14393 721 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 ZC2HC1CQ53FD0 456 aaPredicted RBP16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 GPR158Q5T848 1215 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 LAIR1Q6GTX8 287 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 CENPPQ6IPU0 288 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 UNC13DQ70J99 1090 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 TMC8Q8IU68 726 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 TTC9BQ8N6N2 239 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 TMEM209Q96SK2 561 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 C8orf33Q9H7E9 229 aaPredicted RBP16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 GTSE1Q9NYZ3 720 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 EXOC7Q9UPT5 735 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 PCDHB13Q9Y5F0 798 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 DNAH14Q0VDD8 3507 aa16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 KIF26AQ9ULI4 1882 aaPredicted RBP16.8■□□□□ 0.28
SNRNP48-203ENST00000634363 FRYLO94915 3013 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 MTMR11A4FU01 709 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 ARNTLO00327 626 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 PPEF2O14830 753 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 HRO43593 1189 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 ZNF202O95125 648 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 PIGRP01833 764 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 GABRR2P28476 465 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 CASP1P29466 404 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 LILRA4P59901 499 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 LRRC32Q14392 662 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 ENOX2Q16206 610 aaKnown RBP16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 ARHGAP15Q53QZ3 475 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 FAM26FQ5R3K3 315 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 JADE1Q6IE81 842 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 KRBA2Q6ZNG9 492 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 GAREM2Q75VX8 874 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 SPEM1Q8N4L4 309 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 SENP8Q96LD8 212 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 ACCSQ96QU6 501 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 RTKNQ9BST9 563 aa16.79■□□□□ 0.28
SNRNP48-203ENST00000634363 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 PVALEFA0A1B0GWK0 134 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 SPECC1L-ADORA2AF8WAN1 911 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 OGTO15294 1046 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 PPP1R37O75864 691 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 RETP07949 1114 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 ODC1P11926 461 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 MLLT6P55198 1093 aaPredicted RBP16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 FAM160A1Q05DH4 1040 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 FCHO2Q0JRZ9 810 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 MYBPC2Q14324 1141 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 PON2Q15165 354 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 TAF12Q16514 161 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 KYAT1Q16773 422 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 Q6ZS52 159 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 SYCP3Q8IZU3 236 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 PSMG2Q969U7 264 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 LRRC3BQ96PB8 259 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 SEPT5Q99719 369 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms