RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
NEK3-211ENST00000629912 SNX17Q15036 470 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 CCNG2Q16589 344 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 CCL14Q16627 93 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 FSCN1Q16658 493 aaKnown RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 KIZQ2M2Z5 673 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 TUBB8Q3ZCM7 444 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 LLGL2Q6P1M3 1020 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 DNAJC24Q6P3W2 148 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 TTC27Q6P3X3 843 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 DRICH1Q6PGQ1 229 aaPredicted RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 CCDC137Q6PK04 289 aaKnown RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 LCLAT1Q6UWP7 414 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 RUFY4Q6ZNE9 571 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 LIMS2Q7Z4I7 341 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 PHLDB2Q86SQ0 1253 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 RPAINQ86UA6 219 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 UNC93AQ86WB7 457 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 DDX42Q86XP3 938 aaKnown RBP eCLIP5.89□□□□□ -1.47
NEK3-211ENST00000629912 JAMLQ86YT9 394 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 PASD1Q8IV76 773 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 LRRC52Q8N7C0 313 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 GOLGA6L1Q8N7Z2 621 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 BEST2Q8NFU1 509 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 ATL2Q8NHH9 583 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 STK32AQ8WU08 396 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 DNAJB3Q8WWF6 145 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 C18orf8Q96DM3 657 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 MCRS1Q96EZ8 462 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 KIF12Q96FN5 646 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 SNX27Q96L92 541 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 GDAP1L1Q96MZ0 367 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 SCLT1Q96NL6 688 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 ZIM3Q96PE6 472 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 CELF4Q9BZC1 486 aaKnown RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 MIS12Q9H081 205 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 UPF3AQ9H1J1 476 aaKnown RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 DDX56Q9NY93 547 aaKnown RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 SNTG2Q9NY99 539 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 WHRNQ9P202 907 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 CNTN3Q9P232 1028 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.89□□□□□ -1.47
NEK3-211ENST00000629912 DRG1Q9Y295 367 aaKnown RBP5.89□□□□□ -1.47
NEK3-211ENST00000629912 EFR3BQ9Y2G0 817 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 FAN1Q9Y2M0 1017 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 NFS1Q9Y697 457 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 TLL2Q9Y6L7 1015 aa5.89□□□□□ -1.47
NEK3-211ENST00000629912 FAM170AA1A519 330 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 C17orf102A2RUQ5 167 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 O00370 1275 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 TNPO2O14787 897 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 TREHO43280 583 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 XPOTO43592 962 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 RNF40O75150 1001 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 MICAL2O94851 1124 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 SETSIPP0DME0 302 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 KRT3P12035 628 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 AKR1A1P14550 325 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 CD19P15391 556 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 ATF7P17544 494 aaPredicted RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 ITIH2P19823 946 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 FGFR4P22455 802 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 SSTR3P32745 418 aaPredicted RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 HSD17B3P37058 310 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 RAP1GAPP47736 663 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 GUCY2FP51841 1108 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 NDST1P52848 882 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 SNX16P57768 344 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 RPL7AP62424 266 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 PURAQ00577 322 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 OGDHQ02218 1023 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 CAV1Q03135 178 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 LMNB2Q03252 620 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 ZNF252P-AS1Q0IIN9 211 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 CRHR2Q13324 411 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 TAZQ16635 292 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 PTPN20Q4JDL3 420 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 ZNF394Q53GI3 561 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 C2CD6Q53TS8 623 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 SGO2Q562F6 1265 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 UBXN11Q5T124 520 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 ARHGAP17Q68EM7 881 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 TAF2Q6P1X5 1199 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 DCUN1D2Q6PH85 259 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 ZDHHC24Q6UX98 284 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 SCARA5Q6ZMJ2 495 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 DPH6Q7L8W6 267 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 POLNQ7Z5Q5 900 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 ADAT2Q7Z6V5 191 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 XYLT1Q86Y38 959 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 CCDC105Q8IYK2 499 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 CRYBG2Q8N1P7 616 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 TRPV1Q8NER1 839 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 GRK7Q8WTQ7 553 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 ART4Q93070 314 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 RBM41Q96IZ5 413 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 HEXIM2Q96MH2 286 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 ZMAT2Q96NC0 199 aaKnown RBP5.88□□□□□ -1.47
NEK3-211ENST00000629912 TWNKQ96RR1 684 aa5.88□□□□□ -1.47
NEK3-211ENST00000629912 PPP1R16BQ96T49 567 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms