RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 SALL4Q9UJQ4 1053 aa8.02□□□□□ -1.13
PTP4A1-206ENST00000627002 CAPN6Q9Y6Q1 641 aa8.02□□□□□ -1.13
PTP4A1-206ENST00000627002 HTTP42858 3142 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 ENPP3O14638 875 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 SPTLC1O15269 473 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 FANCGO15287 622 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 TNRC18O15417 2968 aaPredicted RBP8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 PALMO75781 387 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 MTA2O94776 668 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 CALCAP01258 141 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 CALB1P05937 261 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 CLTBP09497 229 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 PRLRP16471 622 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 WARSP23381 471 aaKnown RBP8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 CDH5P33151 784 aaPredicted RBP8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 NOMO3P69849 1222 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 TLE2Q04725 743 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 CNGA2Q16280 664 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 UPP1Q16831 310 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 SOWAHAQ2M3V2 549 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 NOMO2Q5JPE7 1267 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 PAPD7Q5XG87 772 aaKnown RBP8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 C11orf63Q6NUN7 778 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 MON1BQ7L1V2 547 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 RTN4RL1Q86UN2 441 aaPredicted RBP8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 PASD1Q8IV76 773 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 ADGRF2Q8IZF7 708 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 DBF4BQ8NFT6 615 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 OR6B3Q8NGW1 331 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 TPCN2Q8NHX9 752 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 SLC35G2Q8TBE7 412 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 SPATA18Q8TC71 538 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 LINC01599Q8WXQ3 324 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 CPA5Q8WXQ8 436 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 TFAP2BQ92481 460 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 TNIP3Q96KP6 325 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 MRPL45Q9BRJ2 306 aaKnown RBP8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 MIS12Q9H081 205 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 AVENQ9NQS1 362 aaPredicted RBP8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 TMEM39AQ9NV64 488 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 MIOSQ9NXC5 875 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 ADAM22Q9P0K1 906 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 CTTNBP2NLQ9P2B4 639 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 HMGXB4Q9UGU5 601 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 LCMT1Q9UIC8 334 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 LRFN2Q9ULH4 789 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 ATP11BQ9Y2G3 1177 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 INPP5FQ9Y2H2 1132 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 PCDHB7Q9Y5E2 793 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 MRFAP1Q9Y605 127 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 SCINQ9Y6U3 715 aa8.01□□□□□ -1.13
PTP4A1-206ENST00000627002 GRID2IPA4D2P6 1211 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 A8MXQ7 604 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 CYB561D2O14569 222 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 MICAL2O94851 1124 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 KIF4AO95239 1232 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 POMCP01189 267 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 ATP1A1P05023 1023 aaKnown RBP8□□□□□ -1.13
PTP4A1-206ENST00000627002 ODC1P11926 461 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 TCP1P17987 556 aaKnown RBP8□□□□□ -1.13
PTP4A1-206ENST00000627002 IBSPP21815 317 aaPredicted RBP8□□□□□ -1.13
PTP4A1-206ENST00000627002 MMP8P22894 467 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 GNL1P36915 607 aaPredicted RBP8□□□□□ -1.13
PTP4A1-206ENST00000627002 LHX1P48742 406 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 AARSP49588 968 aaKnown RBP eCLIP8□□□□□ -1.13
PTP4A1-206ENST00000627002 CLCNKBP51801 687 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 CCL23P55773 120 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 SNX16P57768 344 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 AMPD2Q01433 879 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 GPNMBQ14956 572 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 WHAMMP3Q1A5X7 153 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 MEI1Q5TIA1 1274 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 ARHGAP17Q68EM7 881 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 DENND1BQ6P3S1 775 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 DCLRE1AQ6PJP8 1040 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 LCLAT1Q6UWP7 414 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 DSTYKQ6XUX3 929 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 NECAB2Q7Z6G3 386 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 SLFN11Q7Z7L1 901 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 DAAM2Q86T65 1068 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 DNAAF5Q86Y56 855 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 ABI1Q8IZP0 508 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 CRYBG2Q8N1P7 616 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 PDCL2Q8N4E4 241 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 LRRC57Q8N9N7 239 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 MYRIPQ8NFW9 859 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 DIS3LQ8TF46 1054 aaKnown RBP8□□□□□ -1.13
PTP4A1-206ENST00000627002 KBTBD7Q8WVZ9 684 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 ARHGEF26Q96DR7 871 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 PAWRQ96IZ0 340 aaKnown RBP8□□□□□ -1.13
PTP4A1-206ENST00000627002 SENP8Q96LD8 212 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 TWNKQ96RR1 684 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 ZSWIM1Q9BR11 485 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 NUP85Q9BW27 656 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 WNT8AQ9H1J5 351 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 MRPL47Q9HD33 250 aaKnown RBP8□□□□□ -1.13
PTP4A1-206ENST00000627002 HESX1Q9UBX0 185 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 CNOT8Q9UFF9 292 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms