RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 CTXN3Q4LDR2 81 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 ZNF394Q53GI3 561 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 FIGNQ5HY92 759 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 TMEM270Q6UE05 265 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 PRSS55Q6UWB4 352 aaPredicted RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 TMC7Q7Z402 723 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 LIMS2Q7Z4I7 341 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 PPFIBP1Q86W92 1011 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 GPIHBP1Q8IV16 184 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 THEM5Q8N1Q8 247 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 UBR7Q8N806 425 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 SPPL3Q8TCT6 385 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 GDPD5Q8WTR4 605 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 AUTS2Q8WXX7 1259 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 ANP32BQ92688 251 aaKnown RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 JAKMIP2Q96AA8 810 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 TCF25Q9BQ70 676 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 STK33Q9BYT3 514 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 GPR88Q9GZN0 384 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 ZBP1Q9H171 429 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 ENTPD7Q9NQZ7 604 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 TLR9Q9NR96 1032 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 CHST7Q9NS84 486 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 DDX43Q9NXZ2 648 aaKnown RBP9.09□□□□□ -0.95
SGMS1-211ENST00000626236 HMGXB4Q9UGU5 601 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 LZTS1Q9Y250 596 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 STXBP5LQ9Y2K9 1186 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 DAAM1Q9Y4D1 1078 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 TRANK1O15050 2925 aa9.09□□□□□ -0.95
SGMS1-211ENST00000626236 PLXNA3P51805 1871 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 A0A1W2PQJ5 194 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 EPOPA6NHQ4 379 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 LRRC53A6NM62 1247 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 F8VZ95 297 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 H7C4K7 107 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 FOXN3O00409 490 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 SOX1O00570 391 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 GABRDO14764 452 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 OAZ2O95190 189 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 GYPCP04921 128 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 FAM163BP0C2L3 166 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 CTSAP10619 480 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 LMO2P25791 158 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 CDC25BP30305 580 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 CASP14P31944 242 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 JAM2P57087 298 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 ERVFC1P60507 584 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 PSMC1P62191 440 aaKnown RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 DSG1Q02413 1049 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 UBE3AQ05086 875 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 KIAA0319Q5VV43 1072 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 PLPP4Q5VZY2 271 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 ZNF280DQ6N043 979 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 PDXDC1Q6P996 788 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 ANKS3Q6ZW76 656 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 ACOT1Q86TX2 421 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 UNC93AQ86WB7 457 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 TTC39CQ8N584 583 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 SPC24Q8NBT2 197 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 RBBP8NLQ8NC74 664 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 ZNF397Q8NF99 534 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 OR10T2Q8NGX3 314 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 LNX1Q8TBB1 728 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 SPATA18Q8TC71 538 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 PIK3R5Q8WYR1 880 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 SHC3Q92529 594 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 BAP1Q92560 729 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 IQCDQ96DY2 449 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 RTP3Q9BQQ7 232 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 TTYH3Q9C0H2 523 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 DPEP3Q9H4B8 488 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 FAM124BQ9H5Z6 455 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 ZNF576Q9H609 170 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 MRPL17Q9NRX2 175 aaKnown RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 MTRRQ9UBK8 725 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 BARX2Q9UMQ3 279 aaPredicted RBP9.08□□□□□ -0.96
SGMS1-211ENST00000626236 SSX2IPQ9Y2D8 614 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 NME7Q9Y5B8 376 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 PCDHGA4Q9Y5G9 962 aa9.08□□□□□ -0.96
SGMS1-211ENST00000626236 PTPRDP23468 1912 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 MYH10P35580 1976 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 RNF225M0QZC1 329 aaPredicted RBP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 RFXAPO00287 272 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 LPXNO60711 386 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 GFPT2O94808 682 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 CXCL14O95715 111 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 CALCAP01258 141 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 OR4Q2P0C623 313 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 RPL17P18621 184 aaKnown RBP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 PCSK1P29120 753 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 SOX5P35711 763 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 STAT1P42224 750 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 FXR1P51114 621 aaKnown RBP eCLIP9.07□□□□□ -0.96
SGMS1-211ENST00000626236 CDR1P51861 262 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 RAD23BP54727 409 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 ARPP19P56211 112 aa9.07□□□□□ -0.96
SGMS1-211ENST00000626236 TSPY1Q01534 308 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms