RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 SH2B1Q9NRF2 756 aaPredicted RBP15.92■□□□□ 0.14
PNKP-218ENST00000625299 CCL26Q9Y258 94 aa15.92■□□□□ 0.14
PNKP-218ENST00000625299 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.92■□□□□ 0.14
PNKP-218ENST00000625299 BAHCC1Q9P281 2608 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 OTOL1A6NHN0 477 aaPredicted RBP15.91■□□□□ 0.14
PNKP-218ENST00000625299 GIPC1O14908 333 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 DCLK1O15075 740 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 ARSAP15289 507 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 NMT1P30419 496 aaKnown RBP15.91■□□□□ 0.14
PNKP-218ENST00000625299 LIG4P49917 911 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 LILRA4P59901 499 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 ELF2Q15723 593 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 UNQ6494/PRO21346Q6UXR6 183 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 MAB21L3Q8N8X9 362 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 ZC3H10Q96K80 434 aaKnown RBP15.91■□□□□ 0.14
PNKP-218ENST00000625299 FAM83CQ9BQN1 747 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 PCDHB6Q9Y5E3 794 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 TCHHQ07283 1943 aa15.91■□□□□ 0.14
PNKP-218ENST00000625299 NPHP3-ACAD11A0A0J9YXS1 232 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 C4orf47A7E2U8 309 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 TRDMT1O14717 391 aaKnown RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 HNRNPDLO14979 420 aaKnown RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 SPINK2P20155 84 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 WEE1P30291 646 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 GBP1P32455 592 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 ZNF252P-AS1Q0IIN9 211 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 PSMD2Q13200 908 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 ENOX2Q16206 610 aaKnown RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 SPATA1Q5VX52 437 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 NAIF1Q69YI7 327 aaPredicted RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 JADE1Q6IE81 842 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 CC2D1AQ6P1N0 951 aaPredicted RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 CAMKK1Q8N5S9 505 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 FAM184AQ8NB25 1140 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 RPLP0P6Q8NHW5 317 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 USP13Q92995 863 aaPredicted RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 CHFRQ96EP1 664 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 DUSP15Q9H1R2 295 aaPredicted RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 FBRSL1Q9HCM7 1045 aaKnown RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 ABI2Q9NYB9 513 aaPredicted RBP15.9■□□□□ 0.14
PNKP-218ENST00000625299 HSFX1Q9UBD0 423 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 KCNG1Q9UIX4 513 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 ZMIZ1Q9ULJ6 1067 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 DENND4CQ5VZ89 1909 aa15.9■□□□□ 0.14
PNKP-218ENST00000625299 SCN1AP35498 2009 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 OBSL1O75147 1896 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 RHOBTB1O94844 696 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 CAVIN2O95810 425 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 NFICP08651 508 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 AMPD2Q01433 879 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 COL9A2Q14055 689 aaPredicted RBP15.89■□□□□ 0.13
PNKP-218ENST00000625299 KARSQ15046 597 aaKnown RBP15.89■□□□□ 0.13
PNKP-218ENST00000625299 IL17AQ16552 155 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 KYAT1Q16773 422 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 C9orf57Q5W0N0 161 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 DTHD1Q6ZMT9 781 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 METTL23Q86XA0 190 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 STKLD1Q8NE28 680 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 FBXO18Q8NFZ0 1043 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 P2RY13Q9BPV8 354 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 MMTAG2Q9BU76 263 aaKnown RBP15.89■□□□□ 0.13
PNKP-218ENST00000625299 MSTO1Q9BUK6 570 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 ZCWPW1Q9H0M4 648 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 MAGED2Q9UNF1 606 aaPredicted RBP15.89■□□□□ 0.13
PNKP-218ENST00000625299 INVSQ9Y283 1065 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 ATRXP46100 2492 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 ASPMQ8IZT6 3477 aa15.89■□□□□ 0.13
PNKP-218ENST00000625299 H0YCG3 227 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 OGTO15294 1046 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 APBB3O95704 486 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 DRD1P21728 446 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 TOB1P50616 345 aaPredicted RBP15.88■□□□□ 0.13
PNKP-218ENST00000625299 GALK1P51570 392 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 TMEM132DQ14C87 1099 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 SH3PXD2AQ5TCZ1 1133 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 DAB2IPQ5VWQ8 1189 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 TXNDC8Q6A555 127 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 THEM5Q8N1Q8 247 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 RIN3Q8TB24 985 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 CDK5RAP3Q96JB5 506 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 PYM1Q9BRP8 204 aaKnown RBP15.88■□□□□ 0.13
PNKP-218ENST00000625299 TDP1Q9NUW8 608 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 LARSQ9P2J5 1176 aaKnown RBP15.88■□□□□ 0.13
PNKP-218ENST00000625299 DSEQ9UL01 958 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 NUP205Q92621 2012 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 IGF2RP11717 2491 aa15.88■□□□□ 0.13
PNKP-218ENST00000625299 MYO16Q9Y6X6 1858 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 K7ENM7 598 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 TULP1O00294 542 aaPredicted RBP15.87■□□□□ 0.13
PNKP-218ENST00000625299 CYB561D2O14569 222 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 FAM189A1O60320 539 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 PLA2G4BP0C869 781 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 HAPLN1P10915 354 aaPredicted RBP15.87■□□□□ 0.13
PNKP-218ENST00000625299 GPR15P49685 360 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 DGKEP52429 567 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 SLC12A3P55017 1021 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 NCKAP1LP55160 1127 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 NLRP12P59046 1061 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 DMC1Q14565 340 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 TMEM150AQ86TG1 271 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms